KEGG   Rahnella aquatilis CIP 78.65 = ATCC 33071: Rahaq2_4473Help
Entry
Rahaq2_4473       CDS       T01770                                 

Definition
formamidopyrimidine-DNA glycosylase Fpg
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
raq  Rahnella aquatilis CIP 78.65 = ATCC 33071
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:raq00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    Rahaq2_4473
Enzymes [BR:raq01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     Rahaq2_4473
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Rahaq2_4473
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
complement(4762265..4763074)
Genome map
AA seq 269 aa AA seqDB search
MPELPEVETSRRGIEPYLKGHTILHAIVRNSRLRWPVSAEILALSDQPVLSVQRRAKYLL
VELQTGWIIIHLGMSGSLRVLPEETEAGKHDHVDLVMDTGHVLRYTDPRRFGAWLWSSDL
AASNVLAHLGPEPLSEDFTADYLCEKSRMKKSPIKPWLMDNKLVVGVGNIYASESLFVAG
ISPDKPAHSLKRDEAELLVRTIKAVLLRSIEQGGTTLKDFLQSDGKPGYFAQELQVYGRA
GEPCRACGTPIESKKHAQRTTFFCPRCQR
NT seq 810 nt NT seq  +upstreamnt  +downstreamnt
atgccggaattacctgaggttgaaaccagccgcagagggattgaaccctatcttaaaggc
cacacaatactgcatgccatcgttcgcaattcgcgcctgcgctggcctgtctcggcggag
atcttagcattaagcgatcagccggttctgagtgtgcagcgtcgggcaaaatatctgctg
gttgagctgcaaaccggatggatcattattcatctgggaatgtccggcagtttgcgggta
ttgccggaagaaaccgaagcaggcaagcatgaccacgttgatctggtgatggacaccggc
catgtgctgcgttataccgatccgcgacgttttggtgcctggctatggtcttctgatctg
gcggccagtaatgtcttagctcatctggggccggagccgctgagcgaagatttcacggca
gattatttgtgtgagaaatcccgcatgaaaaaatcgccgatcaaaccctggctgatggat
aacaaactggtggtcggcgtaggaaatatctatgccagcgaatccttatttgttgccggt
atttcacctgacaaacctgcacattcgctcaaacgtgatgaggcggagttgctggtcaga
accattaaagcggtattgttgcgctctattgaacagggtgggacgacgctgaaggacttt
ctgcaatcggatgggaaaccgggatactttgcgcaggaattacaggtatacggaagggcg
ggcgaaccttgccgggcatgtggtacgcccattgagagtaagaaacatgctcagcgcacc
acgtttttctgcccgcgctgccagcgctaa

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