KEGG T03250: M949

Riemerella anatipestifer CH3: M949_2078

Entry

M949_2078         CDS       T03250

Name

(GenBank) phenylalanyl-tRNA synthetase beta subunit

K01890

phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]

Organism

rat Riemerella anatipestifer CH3

Pathway

rat00970

Aminoacyl-tRNA biosynthesis

Brite

KEGG Orthology (KO) [BR:rat00001]
09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    M949_2078
09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:rat01007]
    M949_2078
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:rat03016]
    M949_2078
Enzymes [BR:rat01000]
6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.20  phenylalanine---tRNA ligase
     M949_2078
Amino acid related enzymes [BR:rat01007]
Aminoacyl-tRNA synthetase
  Class II (U)
   M949_2078
Transfer RNA biogenesis [BR:rat03016]
Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Other AARSs
    M949_2078
Prokaryotic type
    M949_2078

SSDB

Motif

Pfam:

B3_4 tRNA_synthFbeta FDX-ACB B5 tRNA_bind LuxT_C

Other DBs

NCBI-ProteinID:

AIH03244

Position

2131560..2133959

AA seq 799 aa
MKISNNWLKNYIKTDLSSEKIGAYLTDIGLEVEGIETFESIKGSLEGIVVGKVLTCEKHP
NADKLKKTTVDVGGQVLEIVCGAPNVEAGQLVPVAVVGTTLYDKEGNSFEIKKAKIRGEV
SEGMICAEDELGLGTSHDGIMVLDEIHEVGKPFADYFEITKDEVYEIGLTPNRTDAMSHY
GVARDLNAFLYASNITETEFEKVSSDIFQPEGEHGFSIEVENAELCPRYIGAVLDNVKVK
PSPEWLKNKLKAIGLNPINNVVDVTNYILHGLGQPLHAFDADKISGQKVVIGVCNSGTKF
TTLDGVERTLNGTEIMIKDTSDKPMCIAGVFGGADSGVSDSTTKVFLESAYFNPISVRKA
AKAHGLNTDASFRFERGVDVNAVRIAITKAISLLKEVAEAELVGDLIEVYPEKINPHYVL
FRYSKLDQILGVKIHRETVKKILKSLEIEILNEIPDGLELSVPTYRADVTREIDVIEEVL
RIYGYNKIDSPQKIAFSPVKLSFEDQDALENTWARLLQSNGFNEVMNNSLTTVKDETNAV
KLLNPLSNDLAFMRTSLLEGLLQNAVYNINRKNTDIKFFELGKIYHKFETYKERKQLAML
ISGRYQSENWLVPKSSTDFYHLKSYVRLVLEVLGIAIQEKPLQDARFSDGLEFVSEGKVL
ARLGKVALEYLKSADMEQEAFYAEIEVEACQELRTKGNFKFREIPKFNKIRRDLALLLDK
NITYSDLYQEVMKKPSPYLKSVNLFDVYEGKNLPEGKKSYALSFELLNEEKTLEEKEISE
IMGGLITLFEKNFNAELRS

NT seq 2400 nt +upstreamnt +downstreamnt
atgaaaatatcaaataattggttaaaaaactatatcaaaaccgacttgagttcagagaag
ataggagcttaccttacagatatagggttagaagtagaaggtatagaaacttttgagagt
ataaaaggaagtttagagggtattgtggtaggtaaggttttaacttgtgaaaaacaccca
aacgcagataaacttaaaaaaacaaccgtagatgtaggaggtcaagttttagaaattgta
tgtggagcacctaatgtagaggctgggcaattagtacctgtggcagtagtaggaacaacg
ctttatgataaagaagggaatagttttgaaatcaaaaaggctaaaataagaggagaagta
tctgagggaatgatatgtgctgaagatgaactagggttagggactagccatgatggaatt
atggttttagacgaaattcacgaagtaggaaagccttttgcggattattttgaaattacc
aaagatgaagtttatgaaatagggctaacgcctaatagaacagatgcgatgtctcactat
ggtgtggctagagatttaaatgcttttctgtacgcttctaatatcaccgaaacggagttt
gaaaaggtatcgtctgatatttttcagccagaaggtgagcacggattttccatagaggta
gaaaatgcggagctttgccctagatatataggagctgttttagataatgtgaaggtaaag
ccttctccagagtggttaaaaaataaacttaaagccataggtttaaaccctatcaataat
gtggtagatgttaccaactatattttacacggtttggggcaacctctacatgcgtttgat
gcagataaaatttctggacaaaaagtagttataggtgtttgtaattctggaactaaattt
actactttagatggtgtggagcgaacgcttaacggtacagaaattatgataaaagatact
tcggataaaccaatgtgtatcgcaggggtatttggtggggcagattctggcgtttcggat
tcaacgacaaaagttttcctagaaagtgcttatttcaatccaatatcggtaagaaaagca
gcgaaagctcatggtttaaatacagatgcatctttccgttttgaaagaggtgtagatgtt
aatgcggttaggatagcaattactaaagcgataagccttcttaaagaggtggcagaagca
gaacttgtaggagatttaatagaagtttatcctgagaaaataaatccgcattatgtgcta
tttagatattctaagttagaccaaattcttggagttaaaatccatcgtgagacggtaaag
aagatattaaaatcgcttgaaatagaaattcttaacgaaattccagatggtctagagctt
tctgtgccaacttatagagcagatgttactagagagatagatgtaatagaagaagtgctt
agaatctatggatataacaaaatagatagccctcagaagattgcgttttcgccagtaaaa
ttgagttttgaagaccaagatgctttagaaaatacttgggctagattgttacaatctaat
ggatttaatgaagtgatgaataactcgctcactacggtgaaggatgaaaccaatgctgtt
aaattgcttaatccattgagtaatgatttggcatttatgagaacttctctattagaaggt
ttattgcaaaatgcagtctataatatcaaccgtaaaaatacggatattaagttttttgaa
ttaggtaaaatctatcataaatttgaaacttataaagaaagaaagcagttagcaatgctg
atttctggtagatatcaatctgaaaattggcttgtacctaaatctagtacagatttctat
catttaaagtcttatgttagattagtgttagaagttttaggaattgctattcaggagaaa
cctttgcaagatgctcgtttcagtgatggtttagaatttgtttctgaaggtaaggtatta
gcaaggctaggtaaggtagcactagaatatcttaaatcagcagatatggagcaggaggct
ttttatgcagagatagaagtagaggcttgtcaagagttgagaactaaaggtaactttaag
tttagagaaatacctaaatttaataagataagaagagatttagcgttacttttagataag
aacatcacttattcagatttatatcaagaggtaatgaagaagccatcgccgtatcttaaa
tcggttaatttgtttgatgtttacgaagggaagaatttaccagaaggaaagaaatcttac
gctttgagttttgaacttcttaacgaagaaaaaacattagaagaaaaagaaatttcagaa
ataatgggagggttaatcacactctttgagaaaaattttaatgcagagctacgctcgtaa

All links

Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (23)   

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