KEGG T03876: AAT18

Rhodococcus aetherivorans: AAT18_05830

Entry

AAT18_05830       CDS       T03876

Name

(GenBank) pseudouridine synthase

K06177

tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]

Organism

rav Rhodococcus aetherivorans

Brite

KEGG Orthology (KO) [BR:rav00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:rav03009]
    AAT18_05830
   03016 Transfer RNA biogenesis [BR:rav03016]
    AAT18_05830
Enzymes [BR:rav01000]
5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.28  tRNA pseudouridine32 synthase
     AAT18_05830
    5.4.99.29  23S rRNA pseudouridine746 synthase
     AAT18_05830
Ribosome biogenesis [BR:rav03009]
Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    AAT18_05830
Transfer RNA biogenesis [BR:rav03016]
Prokaryotic type
  tRNA modification factors
   Psudouridine synthases
    AAT18_05830

SSDB

Motif

Pfam:

PseudoU_synth_2

Other DBs

NCBI-ProteinID:

AKE88830

Position

complement(1258764..1259684)

AA seq 306 aa
MRRAPLPVRDGLNPTRLRLPDGGSWATVAEFLLARFPADAARVQEKVAAGEVVDGAGAAI
TGNTPYAAGRFVYLYRDPPVEERVPFEIAVLHRDEHLLVVDKPHFLATTPRGSWVAEAAL
VRLRRELDLPELSPAHRLDRLTAGVLVFTVHAGARRAYQSLFDARRVDKEYEAVARHVPG
MRFPREVRSRIVKERGVLQAREVRGEINALSRVELLETDAGLGRYRLLPRTGKTHQLRVH
MNSLGLPILGDNLYPDVYDVAPQDYSRPLQLLARAVEFDDPYTGRRTRFASARNLAAWRH
STPGPR

NT seq 921 nt +upstreamnt +downstreamnt
gtgcgccgtgccccgctgcccgtccgcgacggcctgaatccgacccgcctgcgcctgccc
gacggcggctcctgggcgacggtggcggagtttctgctggcgcgcttccccgccgacgcg
gcgcgcgtgcaggagaaggtcgcggccggtgaggtcgtcgacggtgccggcgcggcgatc
accgggaacaccccgtacgcggcaggccgattcgtgtacttgtaccgcgatccgccggtc
gaggagcgggtgccgttcgagatcgctgtcctgcatcgcgacgagcatctgttggtggtg
gacaagccgcacttcctggcgacgacaccgcgtgggtcgtgggtggccgaggcggcgctg
gtgcggctgcgccgggaactcgacctgccggagctgagcccggcccatcggctcgatcgg
ctcacggcgggcgtgctggtcttcaccgtccacgccggtgcgcgccgggcctaccagtcg
ctcttcgatgcccgccgggtcgacaaggagtacgaggccgtggcccggcacgtgcccggg
atgcggtttccgcgcgaggtgcgcagccgcatcgtcaaggagcgcggcgtgttgcaggcg
cgggaggtgcggggtgagatcaacgccctcagccgcgtcgaactgctcgaaacggacgcc
gggctgggccgttaccggttgctgccccgcaccggcaagacgcaccagttgcgcgtgcac
atgaattcgctcggcctgccgatcctcggggacaacctgtatcccgatgtatatgacgtt
gcgccccaagactattcacgaccactgcagttgctggcccgcgcggtggagttcgacgat
ccgtatacaggtcgacggacccgcttcgccagcgcccgaaacctggcagcatggaggcac
agcacaccaggaccccgttga

All links

Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (11)   

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