KEGG   Rhodococcus aetherivorans: AAT18_07965
Entry
AAT18_07965       CDS       T03876                                 
Name
(GenBank) recombinase RecD
  KO
K03581  exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
Organism
rav  Rhodococcus aetherivorans
Pathway
rav03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:rav00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    AAT18_07965
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rav03400]
    AAT18_07965
Enzymes [BR:rav01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     AAT18_07965
DNA repair and recombination proteins [BR:rav03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     AAT18_07965
SSDB
Motif
Pfam: AAA_19 AAA_30 UvrD_C_2 AAA_11 Viral_helicase1 Helicase_RecD UvrD-helicase AAA_22 SH3_13 RecD_N AAA_24 Mg_chelatase
Other DBs
NCBI-ProteinID: AKE89181
Position
1707196..1709079
AA seq 627 aa
MTNAQVAQRGKGALRVFNEAGVLAAADVHVALRLAQLSGETAEDVHLATALAVRAVRAGS
VCLDLTRLREVTVDEAAEVDLAALPWPDDDAVVAGLRRSPLVVGGDRGPLRPLRLVDTAD
GPLLYLERYFRQEETVRQILDARGLDHPVVDEQTLERGLRELFRDQHDPGRPAAAPDRQR
IAAALAATGWTTVIAGGPGTGKTHTVARILALLTTLHGPALRIGLAAPTGKAAARLQESV
REQAEPLGLRADLSAMTLHRMLGWQRGRTRYRYHAGNHLPYDVVVVDETSMVSLTMMCRL
LEAVRPGTRLILVGDPDQLTSVDAGAVLADLVARPVTAAGNPVLGRVVGPDLDAGDDPAE
AALSPGERNRLRGGVIRLSRGRRFGGDIAHLAVAVREGDADAVMRILGGGGTEVSFHAPN
DLEALRHDVVTTAATVTAAAVAGDAGTALEQFETHRLLCAHREGPYGVQWWARRAMEWIA
TDTGRRLDAERWYPGQPLLVTANDHETRIYNGDTGVVVVDAAGEPVAAFARGREPFRLHP
SQLSAVQTVYAMTIHRSQGSQYGTVSVILPPPESSLLTRELLYTAITRARGHVRLIGTEE
AVRAGVERRVLRASGLRRQLPGPRAVR
NT seq 1884 nt   +upstreamnt  +downstreamnt
gtgacgaacgcccaggtggcccagcgtggcaagggggccctgcgggtcttcaacgaggcc
ggggtgctcgcggccgccgacgtgcacgtcgcgctgcggctggcccagctgtccggggag
accgccgaggacgtgcacctcgcgaccgcgttggccgtgcgcgccgtgcgtgccggttcg
gtgtgcctggacctgacccggttgcgggaagtcaccgtcgacgaggccgcagaggtggat
ctcgcggcgctgccgtggccggacgacgacgccgtcgtcgccgggttgcgccgcagtccg
ctcgtcgtcggcggggaccgcggcccgctgcgcccgctgcgcctggtggacaccgccgac
ggcccgctgctgtatctcgagcgctacttccgtcaggaggagacggtccggcagatcctc
gacgcccgcgggctcgatcatcccgtcgtcgacgagcagacgctcgagcgggggctgcgg
gagctgttccgggaccagcacgaccccggccgcccggccgccgcaccggatcggcagcgc
atcgccgcggcgctggccgccaccgggtggaccacggtcatcgccggcgggccgggcacc
ggcaagacccacaccgtcgcccggatcctggcgctcctgaccacgctgcacggccccgcc
ctgcgcataggattggccgcgcccaccggcaaggccgcggcccggctgcaggaatccgtc
cgcgagcaggccgagccgctgggcctgcgcgccgacctgtccgcgatgaccctgcaccgc
atgctcggctggcagcgcggccgcacccggtatcgctaccacgccggcaaccatctgccc
tacgacgtcgtggtcgtcgacgagacgtcgatggtgtcgctgaccatgatgtgccggctg
ctcgaggccgtccgccccggcacccgcctgatcctggtgggcgaccccgaccagctgacc
tccgtcgacgccggcgccgtcctggccgacctcgtcgcccgtcccgtcaccgccgcggga
aaccccgttctcggccgcgtcgtgggacccgacctcgacgccggcgacgaccccgccgag
gcggcgctctcgccgggggaacggaaccggctgcgcggcggcgtgatccggctcagccgc
ggccggcggttcggtggagacatcgcacacctggccgtcgccgtgcgggagggcgacgcc
gacgcggtgatgcggattctcgggggcggtggcaccgaggtgtccttccacgccccgaac
gacctggaggccctgcggcacgacgtcgtcaccaccgccgcgaccgtcaccgccgccgcc
gtcgcgggcgacgccgggactgcgctcgagcagttcgagacgcaccgcctgctgtgcgcg
caccgcgagggaccgtacggggtgcagtggtgggcgcggcgggcgatggagtggatcgcc
accgacaccggccggcggctcgacgccgagcgctggtacccgggtcagccgctgctcgtc
accgccaacgaccacgagacccgcatctacaacggcgacaccggcgtcgtggtcgtcgac
gccgccggcgaacccgtcgcggcattcgcgcgcggcagggagccgttccggctccacccg
agccagctgtcggccgtgcagaccgtgtacgcgatgacgatccaccgcagccagggcagc
cagtacggcacggtctcggtgatcctgcccccgcccgaatcctcgctgctgacacgcgaa
ttgctgtacaccgcgatcacccgggcgcgcggtcacgtgcgcctgatcggcaccgaggaa
gccgtccgcgccggggtcgagcggcgggtgctgcgagccagcggcctgcgccggcagctg
ccgggccctcgggccgtccggtga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (12)   
   Pfam (12)   
All databases (21)   

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