KEGG   Rhodopirellula baltica: RB10416Help
Entry
RB10416           CDS       T00134                                 

Gene name
xynB
Definition
xylanase (EC:3.2.1.8)
Orthology
K01181  
endo-1,4-beta-xylanase [EC:3.2.1.8]
Organism
rba  Rhodopirellula baltica
Brite
Enzymes [BR:rba01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.1  Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
    3.2.1.8  endo-1,4-beta-xylanase
     RB10416 (xynB)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
5634693..5639387
Genome map
AA seq 1564 aa AA seqDB search
MSSPLNRVIVADIIWRPRALCFQALEMLFSHRRPHHLTPAFSPRQRCRAIFESLEDRRLL
TASPGSNAFEHLDVNRDGTITELDALQVINVLQADHTALGAGKSSVEARHDVNQDGRVSA
VDALWVINFVNDEDTRVINQSLQSEPAPTASISLPGQIRARDIAELTIHSINDLDLSTID
HLEIDWGDGRVTEIKDDLSQPLIRLHSYFIDPATAFVEVRAVPHVGSAIVLQNASIDVVA
NSPFIVDRANEGLTAEVYDNTTFTGPSVSVRTDPTIDFDFGVGSPDPNLNIGSAPFSIRW
QGQFNPIQTTNYTFFAEVGENDTVDFYLDNQLLFTASDGEQSATILLTENQSVDLKVDYV
AGAGVSKIRVGSETGSSFKTALPSNQLTPLVPANQLRSGVLVETFEPVAPSPPLSSIAEL
RDDETFVANTPSTASDISSFSYSAAPGAKVSRIRGIVSPPVSGHYTFHLAASDEAELWLS
QGVTSDTSRLIASVATPTLMEGFTDANAGLSASVYLVAGQDYYVETLQVHDDPVAKNHLS
VAWTRPDQLASGPQLIGNEFLRPIVPQVSLHAEISQTNEVFSVDSSMRFVVIRDDDLGRD
LPVAYTLGGTATNGADYPADTGTVIIPAGQRSAEIELEVTKDGLPEPTETVVIRLVADPA
YQLGSEFTRQVTGTIGGEALGGTELLPVDPILLSAFSYYDVSSPNSVVEFEETDPRLPFV
DASAGNNAIRVDVNSFTNPWDVAFSHTLPPTEIVDGDKLFVSLWARSVNIDGSPVTVGMR
LQESDSYHGKEQTWEVKDEWTPLLWPVVADFNNNATATRGLDIRLGYQQQSVELAGFSLL
KMPGSTEMNSLPRTIFSYEGRDADAAWRAQAKINEQTQRSNPVQILVQDAAGNPVEGAVV
TITPQALSLPMGMAVSPSQVVLSADPISLTADSARYRAIIENYFDTLTDGGEAQWGPWEE
DSQLPTDFLQWVVDRDALYHGHALVWGELDRFPAPADLLTNYEQVETTEGPVAAKAWLER
EVLTHIATGPASAFSGTRDGTDEPLVTWWDVINHPIFSDDLWDIVGDDFMLDVIEAARAV
VHPDTRLIINEFDILSNPDNGQSDDFFNLLTFLDAQSASGRADYDTIGFQGHFLSERLPA
IDRVLAELDRYESFGRNFQITEFDVDALFIDEQTQADFTRDFYQLLASNQAASLFTPWGV
WEGDHWRSEEEAALFNQDWTPKPNGQWLLDQTSDEQTLVRTGASVDAVLNPGSHRIRIEA
DQFDGFYLVDASQTEGVLTFVIDVPPDSMDDHFTANPFDVLPDVSLSTETAFQQPDDQIR
FESSLDLDSIGAENGDWTIGFDLRPDAPPDGQWRSVLFKGDDDSQRGPAVFLRPNDMRLH
VRVSTDHRDDEGLVSDSELPLGVWSNVTIVKRGQRLELYLDGQLDRVRILVGDTLGNVGG
LTLGADFRRPSGIFSVCDLGVLSSAVTHESLTQWTLWGPMSLQSIRGNLSDNDSAISPGD
LLYEWIQPVEELLGGSSFTLSPDGNFTFAAGSLSDSVVTLEIKVRQVTGQFTISTLTIEL
PETA
NT seq 4695 nt NT seq  +upstreamnt  +downstreamnt
ttgagcagtcccctcaatcgggttattgtggcggacatcatctggcgaccgcgagctctc
tgtttccaagccctcgaaatgctgttttctcaccgacgaccccatcacctgacgccggct
ttttcaccgcgtcagcgttgcagggcaattttcgaatcgctcgaggatcgtcgactgctc
accgcatcgcctggcagcaacgccttcgaacatcttgatgtcaatcgagatgggacgatc
actgaactggacgcgttgcaagtcattaatgttctgcaagcggatcataccgcgttgggg
gcaggaaagagttccgtcgaggcccggcatgatgtcaaccaagatggcagggtctcggcc
gtcgatgcgctttgggtcattaactttgtcaatgatgaggacacacgtgtcatcaaccag
tctttgcagagtgaaccggcaccgaccgcttcgatatctttgcctgggcagattcgggca
cgtgacatcgccgagttgaccatccattcgatcaacgacctcgatctttcgaccatcgat
catcttgaaatcgattggggtgacggacgggtgacggaaatcaaggatgatctgtcacaa
ccgctgatacggttgcactcctatttcattgatcccgccacggcattcgtcgaagtccgc
gctgtaccccatgttggttctgcgatcgttctgcagaacgcttcgatcgacgttgtcgcc
aattcgccgttcatcgtcgaccgagccaatgagggactcaccgctgaggtctacgacaac
acgaccttcacagggccgtcggtcagtgtgcgaacggatcccacgatcgacttcgatttt
ggcgttggttctcctgatccaaatttgaacatcggttcggcacccttctcaattcgatgg
cagggccaattcaatccgattcaaactactaactacacttttttcgcagaggttggggaa
aacgatacggtcgacttctacctagataatcaattgctgttcactgccagcgacggtgaa
cagtccgcaacgattctcctcaccgaaaatcaaagcgttgatctcaaggttgattacgtt
gctggggcgggagtttcaaagattcgcgttggcagtgaaaccggatcgtcctttaaaacg
gcattgccgagtaaccaactcacgccgctggttcctgcaaatcaactccgcagcggcgta
ttggttgaaacgtttgagcccgttgccccctccccgccactctcgtcgatcgccgaattg
cgtgatgatgaaacattcgttgctaacacaccgagcactgcgtcggatatcagcagcttc
agttactcggcggcgcccggtgcaaaggtcagtcgaatccgaggcatcgtctcaccgcct
gtcagcgggcattacaccttccatcttgccgccagcgacgaggccgaactgtggttgtcc
caaggcgtcacatctgacacttcccgattgatcgcctcggtggcaacacccacgttgatg
gaaggattcaccgacgccaatgccggtctctccgcatccgtctatctggtcgccggtcaa
gattactacgtcgaaacgctgcaggttcacgacgatccagtggcaaaaaatcatctttcg
gtggcttggactcgtccggaccagcttgcttccggaccacagttgatcggcaacgagttc
ttgcgtccgattgtgccccaggtcagtttgcatgccgagatctcacagacaaacgaggtt
ttttccgtcgactcatccatgcgtttcgtcgtcatacgcgacgacgatctggggcgggat
ctgccggttgcgtacaccctaggaggcactgcaaccaacggtgcggattacccggccgac
accggaaccgtcatcattccagcgggacagcgatctgccgagattgagttggaagtgacc
aaagatggactgcccgaaccgactgaaacagtcgtgattcgattggtcgcagatcctgcc
taccaactcggcagtgaattcactcggcaggtgaccggaacgattggtggagaggcccta
ggcggaacggaactgcttcccgtcgatcccatcctcttgtccgccttttcctactacgac
gtgagctcgccgaactcggtggtcgaattcgaagagactgatcccagactgccgttcgtt
gatgcctccgctggtaacaatgcgatccgagtcgatgtcaactcattcacgaacccgtgg
gacgtcgccttctcacacacgctgccaccaactgagattgtcgacggtgacaagttgttc
gtcagcctttgggcccgcagtgtcaacatcgatggttctccggtgaccgtgggcatgcgt
cttcaggaaagtgacagctatcacggcaaggagcaaacctgggaagtcaaggatgaatgg
actccgttgctttggccagtcgtcgccgacttcaacaacaacgcaaccgctacccgtggt
ctcgatattcggctggggtaccagcagcagtccgttgaactggcaggtttcagcctgctg
aaaatgccgggctcgacggagatgaacagcctcccgcgaacgatcttcagttacgaaggc
cgcgacgcggacgccgcctggcgagcccaggccaagatcaacgagcaaactcagcgatca
aatccggtccaaatcctcgtccaggatgccgccggcaatcctgttgaaggggctgttgtc
acgatcacgccgcaggcactgtctcttcccatgggaatggcagtctcgccctctcaggtg
gtgctgtcagcggatcccatttcattgaccgccgactcggctcgttaccgggcgatcatc
gaaaattactttgacacactgaccgatggtggtgaagctcagtggggcccttgggaagag
gactcgcagcttccaactgatttcttgcagtgggtcgtggatcgcgatgccttgtatcac
gggcacgctcttgtgtggggtgagctcgatcgctttcctgcccctgctgatttgctcaca
aactacgagcaggtagagaccacggagggccccgtcgctgccaaggcttggctcgaaaga
gaagtgctcacgcacattgccaccggtcccgcgtccgcattctctggaacacgggatggc
accgacgagccgctcgtgacgtggtgggatgtcatcaaccatccgatcttcagtgacgac
ctttgggacatcgtcggcgatgacttcatgctcgatgtcatcgaggcggctcgggcggtc
gttcatcccgacacgcgattgatcatcaatgagttcgatattctctccaaccctgacaat
ggccagagcgatgatttcttcaacctgctgacgttccttgacgcccagtccgctagcggt
cgtgccgactacgacacgattggctttcaaggtcattttctgtcagagcgtttacccgcc
atcgaccgcgttctggcggaactcgatcgttacgagagctttggccgcaatttccaaatc
accgaattcgacgtggacgcattgttcatcgatgagcaaacccaagccgacttcacccgg
gacttctatcaactcctggccagcaatcaagccgccagcctcttcacaccttggggggtc
tgggaaggcgatcattggcgttccgaagaagaggccgccctctttaaccaagactggacc
cccaaacccaacggccaatggttgttggaccaaacatctgacgagcaaacgcttgttcga
actggcgccagcgtggacgccgtattaaatcctggatcccatcgcattcggatcgaggca
gatcagttcgatggtttttatctagtggatgcatcccagacggaaggcgttctcacgttc
gtgattgatgtgccaccggactcaatggatgaccacttcactgcaaacccattcgatgta
ttgccggacgtcagcctctcgacagagaccgctttccagcaaccggatgatcaaattcgg
tttgaatcgagtttggatctcgattcgatcggagctgaaaatggcgactggacgattggg
ttcgaccttcgtcctgacgcacctcctgatggccaatggcgttcggtcttgttcaaaggc
gatgacgactcccaacgtgggccagctgttttccttcgccccaatgacatgcggttgcac
gttcgggtttcaacggatcatcgtgacgacgaaggcttggtcagtgattcggaattgcca
cttggagtctggtcgaatgtaaccatcgtaaaacgggggcagcgccttgaactctatctt
gacggacagctcgatcgtgttcggatcttggtcggggataccttgggcaacgtcggaggc
ttgacattgggcgctgatttccgtcggccatcaggcattttttccgtgtgtgatctcggc
gttctctcatccgcagtgacccacgaaagcctaacgcagtggactctttggggaccaatg
agtctccagagcatcagaggtaacctaagtgacaatgacagtgccatctcgcctggcgat
cttctctatgaatggattcaacctgttgaggaattgctcggtggctcatcgttcacgcta
tcaccagatggaaacttcacatttgctgctggttcgctctcggactccgttgtcacactt
gaaatcaaagtccgtcaggtgacggggcaattcaccatctcaactctgacgattgaattg
cctgagaccgcctaa

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