KEGG T00134: RB12133

Rhodopirellula baltica: RB12133

Entry

RB12133 CDS T00134

Gene name

dapE

Definition

ArgE/DapE/Acy1 family protein (EC:3.5.1.16 3.5.1.18)

Orthology

K01438	acetylornithine deacetylase [EC:3.5.1.16]
K01439	succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]

Organism

rba Rhodopirellula baltica

Pathway

rba00300	Lysine biosynthesis
rba00330	Arginine and proline metabolism
rba01100	Metabolic pathways
rba01110	Biosynthesis of secondary metabolites
rba01120	Microbial metabolism in diverse environments
rba01210	2-Oxocarboxylic acid metabolism
rba01230	Biosynthesis of amino acids

Module

rba_M00028

Ornithine biosynthesis, glutamate => ornithine

Class

Metabolism; Amino acid metabolism; Lysine biosynthesis [PATH:rba00300]
Metabolism; Amino acid metabolism; Arginine and proline metabolism [PATH:rba00330]

SSDB

Motif

Pfam:

Peptidase_M20 M20_dimer

Other DBs

NCBI-GI:

32477340

NCBI-GeneID:

1790863

UniProt:

Q7UJ49

Position

complement(6548699..6550105)

AA seq 468 aa
MSQPEQSSSSASQLPAEVQSRLDDGKQRHEAELIEWLKIPSISSDSTRRDDVHQAATWLL
EKMNAAGLQTESISTNGFPLLVASTPPVPGAPVALVYGHYDVQPPEPLDLWTSPPFEPVV
RDGKVFARGATDDKGQVLTHIHSVCDWLASGQPLPLQIKFLIEGEEEVGSQNLDDWLPEL
AEKLACDVVVVSDSSQYAPGRPAVTCGLRGIATYELFVDGPSHDLHSGSFGGAVANPAMA
LCQLLASMKDANGKIAIEGLYDDVAPITDIEREAWKKLGADDAEFASSVGASELHGEAGY
TTDERRWARPSLDINGLTSGHQGEGVKTVLPAKASAKFSFRLVPNQDPKRLTGLIESHLE
RHCPPGIRWTLKPDHGAGAMLADANSRYAKAASVAIEKAFGTPPVMIREGGSIPILARFQ
EVLDCDCLLLGWGQNDDAAHSPNEKFSLEDFHRGIQASASLWQAIASA

NT seq 1407 nt +upstreamnt +downstreamnt
atgtcccaacccgaacaatcttcctcatccgcgtctcagttgcccgccgaagttcagtcg
cgattggacgacggcaaacagcgtcacgaagccgaattgattgagtggttgaaaatccca
agcatcagcagcgattcgacccgccgcgacgacgttcaccaggccgccacttggttgctt
gaaaagatgaacgcggccggcctgcaaaccgaatccatctccaccaacggattcccgctg
ctggttgcctccaccccgccagtccccggtgcccccgtggccctggtttacgggcactat
gacgtccagccacctgagccgctggatctttggaccagcccaccgttcgaacccgttgtc
cgcgacggcaaggtctttgcccgcggtgcaacggacgacaaaggccaagtcctgacgcac
attcacagcgtttgcgattggctcgccagcggacaacccttgccgctgcaaatcaaattt
ttgatcgagggcgaagaggaagtcggcagccaaaacctggacgattggttgcccgagctc
gctgaaaagttggcctgcgacgtggtcgtggtcagcgacagcagccagtacgcaccgggt
cggcccgccgtgacgtgcggcctgcgaggcattgcaacgtacgaattgttcgtcgacgga
ccgagccacgacctgcacagcggcagcttcggtggtgcggtcgccaaccccgccatggct
ctgtgtcagttgctagccagcatgaaagacgcgaacgggaaaatcgcaatcgagggcctg
tatgacgatgtcgccccgattaccgacattgaacgcgaggcttggaagaaactcggtgcc
gacgacgccgaattcgcgagcagcgtcggtgcgtccgaactgcacggcgaagcgggttac
acaaccgatgaacgacgctgggcgcgtccctcgctcgacatcaacggtttgacctccgga
catcaaggcgaaggcgtcaaaacggttttgcctgccaaagcgtccgcgaagttcagcttc
cgattggtgcccaaccaagacccgaaacgtctgaccgggttgatcgaatctcacctcgag
cgtcattgcccgccgggtatccgctggacgctaaaacccgatcacggtgccggtgcgatg
ttggcggatgccaacagccgctacgccaaggcagccagcgtcgcgatcgagaaagcgttc
ggaacaccacccgtgatgattcgcgaaggcggctcgatcccaatcctggctcggttccaa
gaagtcctggattgcgattgcttgcttctcggttggggccaaaacgacgatgccgctcac
agccccaacgaaaagttctcactcgaagatttccaccgaggcatccaagcctccgcctcg
ctctggcaagccatcgcatccgcgtga

All links

Pathway (8)   
   KEGG PATHWAY (7)   
   KEGG MODULE (1)   
Chemical substance (9)   
   KEGG COMPOUND (9)   
Chemical reaction (5)   
   KEGG ENZYME (2)   
   KEGG REACTION (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (2)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (32)   

Download RDF

DBGET integrated database retrieval system