KEGG T00134: RB3466

Rhodopirellula baltica: RB3466

Entry

RB3466            CDS       T00134

Symbol

gyrB

Name

(GenBank) DNA gyrase subunit B

K02470

DNA gyrase subunit B [EC:5.6.2.2]

Organism

rba Rhodopirellula baltica

Brite

KEGG Orthology (KO) [BR:rba00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rba03032]
    RB3466 (gyrB)
   03400 DNA repair and recombination proteins [BR:rba03400]
    RB3466 (gyrB)
Enzymes [BR:rba01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     RB3466 (gyrB)
DNA replication proteins [BR:rba03032]
Prokaryotic type
  DNA Topoisomerases
   RB3466 (gyrB)
DNA repair and recombination proteins [BR:rba03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      RB3466 (gyrB)

SSDB

Motif

Pfam:

DNA_gyraseB DNA_gyraseB_C HATPase_c Toprim HATPase_c_3 HATPase_c_2

Other DBs

NCBI-ProteinID:

CAD73210

UniProt:

Q7UU72

Position

1789942..1791855

AA seq 637 aa
MSVAPKEYNAKNITALEGLEPVRKRPGMYIGGVGSAGLHHLIWEIVDNSVDEAMNGHASE
ITVTLHKDGETVSVSDNGRGIPVDKHPKTKKSALEMVLTVLHAGGKFEGDNYKTSGGLHG
VGASVVNALSKELVAIVKRDGVQYRMAFSRGQATSKLQKLRGTIRGTGTSITFTPDPTIF
PRTTFNGDTIKQRLETASFLHRGVKVTYIDEVAKTRDTFLHENGIVDYLGKVIKEREART
IHEAPFTYRVDDEDRVEVTLQWTESTDEHVRSYVNGIPTGSGGTHENGFRGGVVKAVRNH
VDTHSLTPRGVKITHEDIREGLIAIVSIFVAEPQFQGQTKDRLNNPEAHGLVESGVRSAM
EQWLNNNPSVADAVIARIVAAARARAASRAASEAVSRKGGSKRTLLPGKLSDCVSGGKGK
SELFIVEGDSAGGSAKQGRDRNCQAILPLRGKVLNTESATLKKILDNKEIQDMIASLGCG
IGPSLNLANLRYDRIILLADADSDGHHITTLLLTFFYRHMPALIADGRLFIAVPPLYRID
IGKETFWAADEEDRERILAEHNGRANPEITRFKGLGEMMPKVLWNTTLDPTKRTLLKVEI
DDHLETDRTISDLMGRDASARFRFIMERAEDASEIDV

NT seq 1914 nt +upstreamnt +downstreamnt
atgtccgttgcaccgaaagaatacaacgccaaaaacatcaccgctctggaaggcctcgag
cctgtccgcaagcgtccgggcatgtacatcggtggtgtcggctcggctggtcttcaccat
ttgatctgggaaatcgttgacaattccgtcgacgaggccatgaatggtcacgcgtcggaa
attaccgtgacgctgcataaagacggcgaaacggtatcggtcagcgacaacggccgtgga
attcccgtcgataaacaccccaagacgaagaagtcagccttggaaatggtgctgacggta
ttgcacgccggtggcaagttcgaaggcgacaactacaagacgtccggtggtttgcacggg
gtcggtgcgtcggtcgtcaatgcactgagcaaagaactcgtcgcgattgtcaaacgcgat
ggcgttcaataccggatggctttcagtcgcggtcaagcgacttcaaagttgcagaaactc
cgcggcaccatccgcggtacaggaacctccatcactttcactcccgatccaacgatcttc
ccacgcacgacattcaacggggacacgatcaagcaacgcctggaaacggccagcttcttg
catcgcggtgtgaaggtcacttatatcgatgaagtcgcgaagacgcgtgacacgtttttg
cacgaaaacggcatcgtcgattacctcggcaaagtcatcaaggaacgcgaggctcgcacg
attcatgaagctccgttcacctaccgagtggacgacgaagatcgggtggaagtcacgctc
cagtggacggaatcgaccgacgaacacgttcgcagttacgtcaacggaattccaaccggc
agcggcggcacccacgaaaacggttttcgcggtggcgttgttaaagcggttcgaaaccac
gttgacacgcacagtctgactcctcgcggtgtgaagatcacgcacgaagacattcgcgaa
ggactgattgcgatcgtttcgatcttcgtcgccgagcctcagttccaaggtcaaacaaag
gatcgtttgaacaacccagaagctcacgggttggttgaatcaggtgtccgaagtgcgatg
gaacaatggctgaacaacaatccctcggtcgccgatgcggtgatcgcgcggattgtcgcc
gccgcaagagctcgcgccgcatcgcgtgccgccagcgaagccgtttcgcgaaaaggtggc
tcgaagcgaacgttgttgcccggcaaactttcggattgcgtgtccggcggcaaaggcaag
tccgagttgttcatcgtcgaaggtgattcggcaggcgggagtgccaagcaaggtcgcgat
cggaactgccaagccatccttccgctgcgagggaaggtgctgaacaccgagtcggcgacg
ctgaagaagattctggacaacaaagaaatccaggacatgatcgcgtccctgggttgcggc
atcggtccgtcgctcaacctggcgaatttgcgttatgaccgcatcatcttgttggcagat
gctgacagcgatggtcaccacatcacgacgttgttgttgacgttcttctaccgccacatg
ccagccttgatagcggatggtcgattgttcattgcggttcctccgctttatcgaatcgac
atcggcaaagaaacgttttgggcggcggacgaagaagatcgcgagcgaattttggcggag
cacaatggtcgagcgaatccggagatcacacgtttcaaaggcttgggtgagatgatgccc
aaagtcctatggaatacgacgctggatccgaccaagcggacgttgttgaaggtcgagatc
gatgaccacttggaaaccgatcgcacgatcagcgatttgatgggacgcgacgcatcggcg
cggtttcggttcatcatggaacgagccgaagacgccagcgaaatcgacgtgtag

All links

Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (29)   
   KEGG ORTHOLOGY (1)   
   RefGene (26)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (42)   

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