KEGG   Rhodobaca barguzinensis: BG454_04685
Entry
BG454_04685       CDS       T05218                                 
Name
(GenBank) excinuclease ABC subunit UvrB
  KO
K03702  excinuclease ABC subunit B
Organism
rbg  Rhodobaca barguzinensis
Pathway
rbg03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:rbg00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    BG454_04685
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rbg03400]
    BG454_04685
DNA repair and recombination proteins [BR:rbg03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     BG454_04685
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      BG454_04685
SSDB
Motif
Pfam: UvrB_inter UvrB Helicase_C ResIII UVR DEAD AAA_30 DUF87 UB2H AAA_19 AAA_16 AAA_22 Kinesin AAA TrwB_AAD_bind eIF3_p135 Microtub_bd
Other DBs
NCBI-ProteinID: ATX67683
UniProt: A0A2K8KI78
Position
complement(973995..976172)
AA seq 725 aa
MPHNNLNLPAQRPDVLTRPKLEGGRQFRMASPFLPAGDQPTAIAELVEGVQSGEQNQVLL
GATGTGKTYTMAKIIEETQRPAIILAPNKTLAAQLYGEFKGFFPDNAVEYFVSYYDYYQP
EAYVARSDTYIEKESQINEQIDRMRHSATRALLERDDVIIVASVSCIYGIGSVETYSAMT
QDFEKGESYNQRQVLAELVAQQYRRNDAAFQRGSFRVRGDVIELWPAHLDDRAWKLSFFG
EELEAITEFDPLTGAKTDSFDQIRVYANSHYVTPRPTMQQAIKGIKHELQQRLDQLIAEG
KLLEAQRLEQRTKFDLEMLEATGVCNGIENYSRYLTGRAPGEPPPTLFEFIPDNAIVFAD
ESHVSVPQIGGMYRGDYRRKFTLAEHGFRLPSCMDNRPLKFEEWDAMRPQSVFVSATPAA
WELEQTGGVFTEQVIRPTGLIDPEVEIRPVQMQVDDLLDEIRKVAAKDLRVLCTVLTKRM
AEDLTEYLHEQGIRVRYMHSDIDTIERIEILRDLRLGAFDVLIGINLLREGLDIPECGLV
AILDADKEGFLRSETSLVQTIGRAARNADGRVIMYADRITGSMERALNETNRRREKQIAY
NEAHGITPQTVKKNVEDVLAGLWQGDTDMARVTAQVDKVKPGANLQAHLEGLRADMRKAA
ENLEFEEAARLRDEVKRLEAVELAIADDPLARQSAVDDAVDHAVKPRSTAGRPGQRGGVK
RRGKR
NT seq 2178 nt   +upstreamnt  +downstreamnt
atgccgcataacaacctgaacctgcctgcccagcgccccgatgtcctgacccgccccaaa
ctggaaggcggcaggcagtttcgtatggccagccctttcctgcccgcaggcgaccagccc
acagcgattgcggaactggtcgaaggcgtgcaatcgggtgaacaaaatcaggtgcttctg
ggcgcaacgggtacgggcaaaacctacacgatggccaagatcatcgaggaaacacagcgc
cccgcgatcatccttgcgccaaacaagacacttgcagcccagctttatggcgaattcaag
gggttctttcccgacaacgcggtcgagtatttcgtcagctattacgactattaccagccc
gaagcctatgtcgcgcggtccgatacctatattgagaaggaatcccagatcaacgaacag
atcgaccggatgcgccattcggccacccgcgcgcttctggaacgcgatgatgtgatcatc
gtggcctctgtctcctgcatctatggcatcggctcggttgagacgtattcggccatgacg
caggatttcgagaagggcgaaagctataaccagcggcaggttctggcggaacttgtggcc
cagcagtaccggcgcaacgatgccgcattccagcgcgggtcgttccgcgtgcgcggtgac
gtgatcgaattatggcctgcccatctggacgaccgcgcatggaaattgtcgtttttcggc
gaggagctggaagcgataaccgagtttgaccccctgacaggtgcgaaaactgacagtttc
gatcagatcagggtctacgccaacagccattacgtgaccccgcgcccgaccatgcagcaa
gcgatcaagggcatcaaacatgaattgcagcagcgccttgaccaattgattgccgaaggc
aagttgctggaagcccagcgcctggaacaacgcaccaagttcgatctggaaatgcttgaa
gccaccggcgtatgcaacgggatcgagaattactcgcgctatctgacagggcgcgcaccg
ggcgaaccgccccccaccctgtttgaattcatcccggacaacgcgattgttttcgcagac
gagtcgcatgtcagcgtgccgcagatcggcggcatgtatcgcggcgactaccggcgcaaa
ttcacgctggccgaacacgggttccggctgccctcctgcatggacaatcgcccgctcaaa
ttcgaggaatgggacgccatgcgcccgcaatcggtgtttgtatccgcaaccccggccgca
tgggaactggaacagacgggtggggtgtttacggaacaggtcatccgccccaccgggctg
atcgaccctgaagtggagattcgacctgtccagatgcaggtcgatgatctgctcgatgaa
atccgcaaggttgctgcaaaggacctgcgcgtgctgtgcaccgtcctgaccaaacgcatg
gccgaggatctgaccgaatacctgcacgagcagggcatccgcgtgcgctacatgcactct
gatatcgacacgattgaacgtatcgagatcctgcgcgacctgcgactgggcgcgtttgat
gtcttgatcggcatcaacctgctgcgcgaggggctggatattcccgaatgcgggttggtt
gccattctggatgcggacaaagaggggttcctgcgctctgaaaccagccttgtccagaca
atcgggcgcgctgcacgcaatgccgatgggcgcgtgatcatgtatgccgaccggatcacc
ggctctatggagcgcgcgctgaacgaaaccaaccggcggcgcgaaaaacagatcgcctat
aacgaggcgcatgggatcacgccccagaccgtcaagaagaatgtcgaagatgtgctggcc
gggctttggcagggcgacacggatatggcccgcgtgaccgcgcaggttgacaaggtaaaa
cccggcgcgaacctgcaagcccatcttgaagggctgcgggccgatatgcgcaaggccgcc
gaaaatctggaattcgaggaagccgcccgcctgcgtgatgaagtgaaacggctggaggca
gttgaacttgccattgcggatgatccgctggcgcgccaatccgccgtggatgatgctgtt
gaccatgcggtcaagccgcgctcgaccgcagggcgaccgggacagcgtggtggcgtaaag
cgccggggcaaaagatga

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