KEGG   Robiginitalea biformata: RB2501_06370
Entry
RB2501_06370      CDS       T00992                                 
Name
(GenBank) succinate dehydrogenase
  KO
K00239  succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
Organism
rbi  Robiginitalea biformata
Pathway
rbi00020  Citrate cycle (TCA cycle)
rbi00190  Oxidative phosphorylation
rbi00650  Butanoate metabolism
rbi01100  Metabolic pathways
rbi01110  Biosynthesis of secondary metabolites
rbi01120  Microbial metabolism in diverse environments
rbi01200  Carbon metabolism
Module
rbi_M00009  Citrate cycle (TCA cycle, Krebs cycle)
rbi_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:rbi00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00020 Citrate cycle (TCA cycle)
    RB2501_06370
   00650 Butanoate metabolism
    RB2501_06370
  09102 Energy metabolism
   00190 Oxidative phosphorylation
    RB2501_06370
Enzymes [BR:rbi01000]
 1. Oxidoreductases
  1.3  Acting on the CH-CH group of donors
   1.3.5  With a quinone or related compound as acceptor
    1.3.5.1  succinate dehydrogenase
     RB2501_06370
SSDB
Motif
Pfam: FAD_binding_2 Succ_DH_flav_C DAO Pyr_redox_2 GIDA NAD_binding_8 AlaDh_PNT_C CheR_N HI0933_like
Other DBs
NCBI-ProteinID: EAR16502
UniProt: A4CHU4
Position
671395..673398
AA seq 667 aa
MATLDSKVPSGPLADKWTKHKNEINLVNPANKRNIDIIVVGTGLAGGAAAATLAELGYNV
KTFCYQDSPRRAHSIAAQGGINAAKNYQGDGDSPYRLFYDTIKGGDYRSREANVYRLAEE
SVNIIDQCVAQGVPFAREYGGLLDNRSFGGVLVSRTFYAKGQTGQQLLLGCYAAMNRQIN
RGKIRPYNRHEMLDLVLVDGKARGIIARDLVTGEIERHSAHAVVLASGGYGNVFYLSTNA
MGSNVTAAWRAHRRGAYFANPCFTQIHPTCIPVSGDHQSKLTLMSESLRNDGRIWVPKRK
EDAEAIRAGKLKPTQLAEEDRDYYLERRYPAFGNLVPRDVASRAAKERCDAGYGVNKTGE
AVYLDFAAAIERYGKEKAYTSGIKDPDKETITKLGKEIIAAKYGNLFQMYEKIVDDNPYD
TPMMIYPAVHYTMGGLWVDYNLQTTIPGCYCAGEANFSDHGANRLGASALMQGLADGYFV
LPYTIGDYLSDDIRTGPIPTDSEAFDKAEADVRSRLERLLNANGTKSVDYYHKKLGKIMW
NKCGMSRNAQGLEEAIEEIAALRKEFYENVRVPGSMDETNPELEKAGRVADFLELGELFA
KDALHRNESCGGHFREEYQTPEGEALRDDENFKFVSAWEYKGEPKDAVLHKEDLVFENIE
LKTRSYK
NT seq 2004 nt   +upstreamnt  +downstreamnt
atggcaaccctggattccaaagtcccctccggcccgctggccgataagtggacaaagcac
aagaacgagatcaatctggtcaacccggccaacaagcggaatatcgatattatcgtcgtc
gggaccggcctggccggcggggcggcagctgccaccctggcggaactcgggtacaacgtg
aagaccttctgttaccaggattccccccgccgggcgcacagcatcgcggcccagggcggg
atcaatgcagccaagaactaccagggcgacggggacagcccctaccgcctgttttacgat
accatcaaagggggcgactaccgctcccgggaagccaacgtctaccggctggccgaagag
tccgtgaacatcatcgaccagtgtgtggcccagggggtcccatttgcccgggaatacggc
gggctcctggataaccgctcctttgggggggtactcgtatcccggacgttttacgccaag
gggcagaccggccagcaactgctgctgggctgctatgcggccatgaaccggcagatcaac
cggggcaagatccggccctacaaccggcacgaaatgctggacctggtcctggtggacggc
aaggcccggggcatcatcgcccgcgacctggtaaccggggagattgagcggcacagcgcc
cacgccgtggtgctggcatccggcgggtacggcaatgtcttctatctctccacgaatgcg
atggggagcaacgtaacggctgcctggcgcgcccaccggcggggggcttattttgccaac
ccctgctttacgcagatccaccctacatgcatcccggtttccggcgaccaccagtccaag
ctcacgctcatgtccgaatccctgaggaatgacggacggatctgggtacccaaacgcaaa
gaggacgccgaggcgatccgcgccgggaaactcaagcccacccagcttgcggaagaggac
cgggattactacctggagcgccgctacccggccttcggtaacctggtgccccgggacgtg
gcctcccgcgccgccaaggaacgctgcgatgcgggctacggggtcaacaagacgggcgag
gccgtctacctggactttgctgcggccattgagcgctacggcaaggaaaaagcctatacc
tccgggatcaaagacccggacaaggagaccatcaccaagctgggcaaggaaatcatcgcc
gccaaatacgggaacctcttccagatgtacgaaaagatcgtcgacgacaacccctacgat
acgccgatgatgatctacccggccgtccactacaccatgggcgggctctgggtggactac
aacctgcaaaccactatcccgggctgctactgcgccggggaggcaaatttcagcgaccac
ggggccaaccgcctgggcgcctccgccctgatgcaggggctggccgacgggtattttgtg
ttgccctatactattggcgactacctctccgacgacatccgtaccgggcccatcccgacg
gacagcgaggccttcgacaaggccgaggccgacgtgcgctcccgcctggaacgcctgctg
aatgccaacggcacaaaatctgtggattactaccacaagaagctcggcaagatcatgtgg
aacaaatgcgggatgtcccggaatgcccagggtcttgaggaggccatcgaggagattgcc
gccctgcgcaaggagttctacgaaaacgtccgggtacccggcagcatggacgagacaaac
cccgagctggaaaaagccgggcgcgtagccgatttcctggaactcggcgaactctttgcc
aaggatgccctgcaccggaacgaatcgtgcggcgggcatttccgcgaagagtaccagacc
ccggaaggggaagccctgcgggacgacgagaatttcaagttcgtttccgcctgggaatac
aagggggaacccaaggatgccgtactccacaaggaggacctggtgtttgagaatattgag
ttgaaaacacggagctataagtaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (13)   
   KEGG PATHWAY (7)   
   KEGG MODULE (6)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (97)   
   KEGG ORTHOLOGY (1)   
   RefGene (94)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (129)   

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