KEGG   Robiginitalea biformata: RB2501_16164
Entry
RB2501_16164      CDS       T00992                                 
Name
(GenBank) RNA methyltransferase, TrmA family protein
  KO
K03215  23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
Organism
rbi  Robiginitalea biformata
Brite
KEGG Orthology (KO) [BR:rbi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:rbi03009]
    RB2501_16164
Enzymes [BR:rbi01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.190  23S rRNA (uracil1939-C5)-methyltransferase
     RB2501_16164
Ribosome biogenesis [BR:rbi03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    RB2501_16164
SSDB
Motif
Pfam: tRNA_U5-meth_tr Methyltransf_31 TRAM Methyltransf_25 MTS Cons_hypoth95 Methyltransf_15 UPF0020 PCMT N6_N4_Mtase Methyltransf_11
Other DBs
NCBI-ProteinID: EAR15879
UniProt: A4CLY0
Position
2793799..2795328
AA seq 509 aa
MPLRNQKCAAGNNRYFGQVPQEILAMAASRKQRIFAPMARGRKHPFFEKIEVTGTAAKGK
AVGRAPDGRVVFISGAVPGDTVSVQVFKKRKGHYEGRVTEILNPSPERIQPRCVHFGTCG
GCKWQHMDYAAQLRFKQDEVVQNLVRIGKLDLPDIAPILPAPETYYYRNKMEFSFSDNRW
LEPGEIASGEPVASRNALGLHIPGMWDKILDLQECHLQADPSNAIRLAVREYAESHGLAF
FDTRKQEGLLRSLMLRNTASGQVMVLIQFYQDDASAREGLLDFLLDRFPQITSLFYTINR
KGNDTLYDLDLICYHGTPYITEEMEGLAFRITPKSFYQTNSRQAYALYKKVRELAGLTGK
ERVYDLYTGLGTIAQFVARQAREVIGIEAVADAIEAARVNAAENGISNTRFFAGDMKELF
TSEFLETHGRPDVVITDPPRDGMHKYVVAQLLEILPERIVYVSCNSATQARDLALMRDAY
RVAHVQPVDMFPQTHHVENIVLLERRSHE
NT seq 1530 nt   +upstreamnt  +downstreamnt
ttgcccctgaggaaccaaaaatgcgccgccgggaacaaccgctacttcgggcaggtgccc
caggagattctcgctatggccgcaagcagaaaacaacgtatttttgcccccatggcaaga
ggcaggaagcatccattttttgaaaaaatcgaagtgaccggtaccgcggcaaagggaaaa
gcggtgggcagggccccagatggccgggtggtctttatttccggagccgtcccgggggat
accgtttcggtccaggtgttcaaaaagcgcaagggacactacgagggccgggtaacagag
atcctgaatccctcccccgaacgcattcaaccccggtgtgtccattttggcacctgcggg
ggttgcaaatggcaacatatggactacgccgcccaactccgctttaaacaggatgaagtg
gttcagaacctggtgcgtatcgggaagctcgaccttccggatatagcccctatcctcccg
gccccggaaacctattactaccggaacaaaatggaattctccttttcggataaccggtgg
ctggaacccggggaaatcgcctccggggaaccggtggcaagccggaacgccctgggcctg
catatcccggggatgtgggataaaatcctggacctgcaagaatgccacctgcaggccgat
ccgtcgaatgctatccgcctggccgtccgcgagtatgcggaatctcacggactcgccttt
tttgacacccgcaaacaggaaggcttgttgcgcagcctgatgcttcgcaataccgcatcg
ggccaggtgatggtacttatccagttctaccaggacgacgccagcgcccgggaaggcctg
ctggacttcctgctggatcgtttcccgcaaatcacctccctgttttataccatcaaccgc
aaagggaacgatacgctgtacgacctggacctgatttgctaccacggcaccccttatatc
acagaggagatggaggggctggccttcaggatcaccccgaaatcgttttatcagaccaat
tcccgtcaggcatatgcgctttacaaaaaagtacgggaactggcgggcctcaccggaaaa
gagcgggtttatgacctgtataccggcctgggcaccatcgcccagtttgtggcccgacag
gcccgggaggttatcgggattgaagccgttgccgacgccattgaggccgcccgggtaaat
gcggccgaaaacggcatctcaaacacccggttttttgccggggatatgaaggaactcttc
acctcggaattcctggaaacccacggcaggccggatgtggtgatcacggacccgccccgg
gacggaatgcacaagtatgtcgtggcccaattgctggaaatcctgcctgagcggatagtc
tatgtgagttgcaacagcgctacccaggcccgcgacctggcccttatgcgggatgcctac
cgggttgcacacgttcagcctgttgatatgttcccgcagacgcaccacgtggaaaatatc
gtacttttagagcgccgcagccatgaatag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (38)   
   KEGG ORTHOLOGY (1)   
   RefGene (35)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (11)   
   Pfam (11)   
All databases (55)   

Download RDF
DBGET integrated database retrieval system