KEGG T04092: RBXJA2T

Rubrivivax benzoatilyticus: RBXJA2T_11688

Entry

RBXJA2T_11688     CDS       T04092

Name

(GenBank) (dimethylallyl)adenosine tRNA methylthiotransferase

K06168

tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]

Organism

rbn Rubrivivax benzoatilyticus

Brite

KEGG Orthology (KO) [BR:rbn00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:rbn03016]
    RBXJA2T_11688
Enzymes [BR:rbn01000]
2. Transferases
  2.8  Transferring sulfur-containing groups
   2.8.4  Transferring alkylthio groups
    2.8.4.3  tRNA-2-methylthio-N6-dimethylallyladenosine synthase
     RBXJA2T_11688
Transfer RNA biogenesis [BR:rbn03016]
Prokaryotic type
  tRNA modification factors
   Methylthiotransferases
    RBXJA2T_11688

SSDB

Motif

Pfam:

UPF0004 Radical_SAM TRAM TRAM_2 Fer4_12

Other DBs

NCBI-ProteinID:

EGJ10985

AA seq 444 aa
MKKVYIRTFGCQMNEYDSAKMADVLNAAGGYEPTDDPEQADLVLFNTCSVREKAQEKVFS
DLGRVKHLKKKGVLIGVGGCVASQEGAAIIERAPYVDMVFGPQTLHRLPQMIAARSNERR
PQVDISFPEIEKFDHLPPPRIEGASAFVSIMEGCSKYCTYCVVPYTRGEEVSRPFEDVLT
EVADLADRGVKEVTLLGQNVNAYRGAMGESGEIADLALLLEYVAEVPGIERIRFTTSHPN
EFTQRLIEAYGRIPKLVSHLHLPVQHGSDRILSAMKRGYTALEYKSTIRKLREQRPGISL
SSDFIVGFPGETEDDFAKTMKLIDDVGYDASFSFVYSQRPGTPAAALDDDTPQELKLARL
QTLQAAIEANVRRISASRVGTRQTILVEGPSKKNPQELMGRTECNRIVNFDGGPTPSRLI
GQMLDVTITEALPHSLRGTPVLAD

NT seq 1335 nt +upstreamnt +downstreamnt
atgaaaaaggtctacatccgcaccttcggctgccagatgaacgagtacgactcggccaag
atggccgacgtgctcaacgccgccggcggctacgagcccaccgacgaccccgagcaggcc
gacctcgtgctgttcaacacctgctcggtgcgcgagaaggcgcaggagaaggtcttcagc
gacctcggccgcgtcaagcacctgaagaagaaaggcgtgctgatcggcgtcggcggctgc
gtcgccagccaggaaggcgcggcgatcatcgagcgcgcgccctacgtcgacatggtcttc
ggcccgcagacgctgcaccggctgccgcagatgatcgccgcgcgcagcaacgagcgccgg
ccgcaggtcgacatcagcttcccggagatcgagaagttcgaccacctgccgccgccgcgc
atcgaaggtgccagcgccttcgtctcgatcatggaaggctgctccaagtactgcacctac
tgcgtcgtgccctacacgcgcggcgaggaagtgagccggccgttcgaggacgtgctgacc
gaagtcgccgacctcgccgaccgcggcgtcaaggaagtgacgctgctgggccagaacgtc
aacgcctaccgcggcgcgatgggagagtccggcgagatcgccgacctggcgctgctgctg
gagtacgtggccgaggtgccgggcatcgagcgcatccgcttcacgaccagccacccgaac
gagttcacgcagcgcctgatcgaggcctacggccgcatcccgaagctggtctcgcacctg
cacctgccggtgcagcacggcagcgaccgcatcctctcggcgatgaaacgcggctacacc
gcgctcgaatacaagagcacgatccgcaagctgcgcgagcagcgccccggcatcagcctg
tcgtcggacttcatcgtcggcttccccggcgagaccgaggacgacttcgcgaagacgatg
aagctgatcgacgacgtcggctacgacgccagcttcagcttcgtctacagccagcgcccg
ggcacgccggccgcggcgctggacgacgacacgccgcaggaactcaagctcgcgcggctg
cagacgctgcaggcggcgatcgaggccaacgtgcgccgcatcagcgcctcgcgtgtcggc
acgcgccagaccatcctcgtcgaaggcccgtcgaagaagaacccgcaggagctgatgggc
cgcaccgagtgcaaccgcatcgtcaacttcgacggcggcccgaccccgtcgcggctgatc
ggccagatgctggacgtgacgatcaccgaggcgctgccgcactcgctgcgcggcacgccg
gtgctggcggactga

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (4)   
   KEGG ENZYME (1)   
   KEGG REACTION (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (24)   

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