KEGG   Rickettsiales bacterium Ac37b: NOVO_04590
Entry
NOVO_04590        CDS       T03234                                 
Symbol
rho
Name
(GenBank) Transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
rbt  Rickettsiales bacterium Ac37b
Pathway
rbt03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:rbt00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    NOVO_04590 (rho)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rbt03021]
    NOVO_04590 (rho)
   03019 Messenger RNA biogenesis [BR:rbt03019]
    NOVO_04590 (rho)
Transcription machinery [BR:rbt03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     NOVO_04590 (rho)
Messenger RNA biogenesis [BR:rbt03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     NOVO_04590 (rho)
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N OB_RNB AAA_22 ATPase_2 AAA_25 Spore_III_AA AAA NACHT
Other DBs
NCBI-ProteinID: AIL65296
UniProt: A0A077FPT3
Position
907403..908713
AA seq 436 aa
MNEIVATHNNTENNVYLKNFKRKLPAELLAEAEQYGVENPNVLLKQDIIFAILKKIAEQG
GVIIGEGVLEVLPDGFGFLRSPEANYSAGTDDIYVSPSQIKKFSLRTGDTVEGQIRAPKQ
GERYFALLKVTKINFDTPELSTHRINFDNLIPLYPNQRINLEHLEMAGINGSKDLSNRVI
DLVCPLGKGQRALIVAPPRSGKTVLMQNIAHAITANHPEIYLIVLLIDERPEEVTDMARS
VKGEVVSSTFDEPAVRHVQLAEMVIEKAKRLVEQGKDVVILLDNITRLARAYNTVVPSSG
KVLTGGVDSNALQRPKRFLGAARNIEDGGSLTIIATALIETGSRMDEVIFEEFKGTGNSE
IVLDRKIAEKRIFPAIDITRSGTRKEELLYDKSTLSKIWVLRRILVSMGPVDAIEFLLDK
MKNSKTNNEFFDLMNS
NT seq 1311 nt   +upstreamnt  +downstreamnt
atgaatgaaattgttgcaactcataataataccgaaaataatgtttatttaaaaaatttt
aaaagaaaacttcctgcagagttacttgctgaagcagaacaatacggagtagaaaatcct
aatgtattgcttaagcaagatataatttttgctattctaaaaaaaatagctgaacaaggt
ggagtgattattggtgaaggggttttagaagttttacctgatgggtttggattcttaagg
tcaccagaagctaattattctgctggtactgatgatatatatgtttctcccagtcaaatc
aaaaaatttagtttaagaacaggagatacggttgaaggacaaattagggctcctaaacaa
ggtgaaagatattttgctttactaaaagttacaaaaattaattttgatacgcctgaatta
tctactcatagaatcaattttgataacttaataccattatatcctaatcagagaattaat
ttagaacatttagaaatggctggtataaatggttcaaaagatttaagtaatagagtaatc
gatttggtatgtcctcttgggaaagggcaaagagcattaatagtagctccaccgcgtagt
ggtaaaacagtattaatgcagaatatagcacatgctattacagctaaccatcctgaaata
tatttgatagtattgcttatagatgagcgtcctgaagaagtaactgatatggctagatca
gtaaaaggagaagttgttagttctacatttgatgaaccagcagtacgtcatgtgcagtta
gcagaaatggtaattgaaaaagctaaaagattagtagaacaaggtaaggatgtagttata
ttacttgataatataacaagacttgcaagagcatataatacagtagttccttcttctgga
aaagtactaacaggtggtgtggattcgaatgctttgcaaaggcctaaaagatttttggga
gcagcaagaaatatagaagatggaggatcgcttactattatagctactgcattaatagag
acaggttctcgtatggatgaagttatttttgaagaatttaaaggtactggtaactccgaa
atagtattagatagaaaaattgctgaaaaaaggatatttccagcaatcgacattacaaga
tctggtaccagaaaagaagaattattgtatgataaatctactttatctaaaatatgggta
ttaagaagaatattagtatcaatgggtccagtggatgctatagagtttttattagataaa
atgaaaaattctaaaacgaataatgaattttttgacttaatgaattcatag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   RefGene (2)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (10)   
   Pfam (10)   
All databases (21)   

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