KEGG   Rugosibacter aromaticivorans: PG1C_14185
Entry
PG1C_14185        CDS       T03689                                 
Name
(GenBank) primosomal protein DnaI
  KO
K04066  primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
Organism
rbu  Rugosibacter aromaticivorans
Pathway
rbu03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:rbu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    PG1C_14185
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rbu03400]
    PG1C_14185
Enzymes [BR:rbu01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     PG1C_14185
DNA repair and recombination proteins [BR:rbu03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     PG1C_14185
SSDB
Motif
Pfam: PriA_3primeBD DEAD PriA_C ResIII PriA_CRR Helicase_C AAA_30 AAA_16 HypA ADDB_N SLFN-g3_helicase AAA_19 T2SSE zinc-ribbons_6
Other DBs
NCBI-ProteinID: AJP49273
UniProt: A0A0C5JBQ5
Position
2912919..2914928
AA seq 669 aa
MSIVRVALDLPLLRLFDYLAPGASASDIGYRVSVPFGRSLRMGVIVDWIATSEQPVDKLK
PVTAILRDIPPLPTDWLALCEFCARYYQAPLGEVMAFALPPMLRRGKHPRPQKAKKDLNA
VSAKHESKPASTVCLPSLLAAQQAAVEQIVSTTAFQTFLLHGVTGSGKTEVYLRAIEATL
AQGRQALMLVPEIALTPQLESRVRARLPHAHLVVANSSVADAARARGFLDALTGNAEIVL
GTRLAIFTPLPRLRLIIVDEEHDASFKQQDGVRYSARDLAIWRAHQQNCPIVLGSATPSL
ESFHHALAGRYHMLTLPLRAVAEAPPIVRTIDTRREKLQEGLSVALINALEQRLGRGEQS
LVFLNRRGYAPVLACPACGWISRCQHCAANLVVHLADKHLRCHHCGFETAIPHACPDCGN
VDLQPFGRGTQRLESALIERFPQARILRVDRDSANSAKKWQALLASIHAGEVDILIGTQM
LAKGHDFPKLTLVGAVGADAALFAADFRAPERLFAQLMQVGGRSGRADLPGEVLIQTEYP
THPLYQALIDHDYSRFAQSQLEERKTAGFPPFTFQAMLRAESRSMGESVAFLAQARDFAL
AFADSYITLYEPVPMRLHRLMALERAQLLVESDNRPALQHFLAQWQTALYTLKRPRTLRW
HVDVDPLEF
NT seq 2010 nt   +upstreamnt  +downstreamnt
atgagcatcgtccgcgtcgccctcgatctgcctctactccgattgtttgattatctggcg
cccggggcaagtgccagcgatattggctaccgcgttagcgtgccctttggtcggagcttg
cgcatgggtgtcattgtcgattggatagcaaccagtgaacagccggtagataagttaaag
ccggtcacggcaattttgcgcgacataccgcctttacccaccgactggctggcgttgtgt
gaattttgcgcgcgctactaccaagcaccgcttggtgaagtcatggcgtttgcattgccc
cctatgcttcggcgcggcaaacaccctcgcccccaaaaggcaaaaaaagatctaaatgct
gtatcagccaaacacgaatctaaaccagcttcgactgtttgtttgccttccttgttagct
gcacaacaagccgctgtcgaacagattgtcagcacaacggcctttcaaacctttttgctg
catggggttaccggcagcggcaagaccgaagtgtatttacgcgccatagaggcaacctta
gcgcaggggaggcaagcgttgatgctggtgcctgaaattgcactcacaccgcaacttgaa
agtcgcgtacgggcgcgcttgccgcacgcccatttggtggttgccaacagcagtgtggct
gatgccgcccgcgcccgtgggtttcttgatgcgctcaccggaaacgctgagattgtgctc
ggtacgcggctggcgatatttacccccctgccccgcttgcggctgattattgtggacgag
gagcacgatgcctcattcaaacagcaagacggtgtgcgttattcggcgcgcgatctggcc
atttggcgggcgcatcaacaaaactgcccgattgttcttggctcggccaccccgtcactg
gaaagttttcatcatgctttagccggacgctatcacatgttaaccctgccgctccgcgct
gttgctgaagcaccgcccatcgtgcgcaccatcgatacgcgccgcgaaaaattacaagaa
ggcttaagtgttgcgctcattaacgcactcgaacaacgactaggccgtggcgaacaaagc
ctggtgtttctgaatcgacgcggctacgccccggtgctggcatgccctgcctgtggctgg
atttcccgctgtcagcattgcgctgccaatctggtggtgcatctggcagataaacatttg
cgctgccatcattgcgggtttgagaccgcgattcctcacgcctgcccggattgtggcaat
gtcgatttgcagccttttggacgcggtacccaacgacttgaatcggcgttgatcgaacgc
tttccgcaggcgcgtattttgcgtgttgaccgtgattctgcgaatagcgctaaaaaatgg
caggcgctcttggcgagcattcacgcaggtgaggtggatattctgattggcacccaaatg
ctggccaaagggcatgatttccccaagctcactttggtcggcgctgtcggtgcggatgca
gcactcttcgcggctgactttcgtgcgcctgaacgactctttgcgcagctcatgcaggtg
ggtggccgtagcggccgcgccgatctgcctggtgaggtgttgatacaaacagaatacccg
acccatccgctctatcaggcactgattgatcatgactacagccggtttgcacaatctcaa
ctcgaggaacgtaaaacagccggctttcctccgttcacattccaggccatgctgcgcgcc
gaaagccgatccatgggtgagtcagtggcctttttagcccaggcccgtgactttgcgctg
gccttcgccgacagctatatcacgctgtacgaacccgtaccgatgcgtctgcatcggctg
atggcgctggaacgcgctcagttgctggtggaatctgataaccgcccggcgttgcagcat
tttctggcacaatggcaaactgcgctttacaccttaaaacgcccccgcacgctgcgctgg
catgtggacgtcgatccactcgagttctag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (14)   
   Pfam (14)   
All databases (36)   

Download RDF
DBGET integrated database retrieval system