KEGG   Roseiflexus castenholzii: Rcas_3836Help
Entry
Rcas_3836         CDS       T00585                                 

Definition
formamidopyrimidine-DNA glycosylase (EC:3.2.2.23)
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
rca  Roseiflexus castenholzii
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:rca00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    Rcas_3836
Enzymes [BR:rca01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     Rcas_3836
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Rcas_3836
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
UniProt: 
Position
5014807..5015658
Genome map
AA seq 283 aa AA seqDB search
MPELPEVQHTADSLGIQIAGARIARVERLDWTRMVETPSPDEFIRLLTGRQVRGWDRRAK
WILLFLDDGWTLALHLRMSGSLTVHPAEAQPDKHTHLALRLEDGRQIFFLDPRKFGRARL
LDSAGLAALDAAHGDEPLSDAFTVERLASLLRNRKRAIKPLLLDQSVIAGIGNIYADEAL
WRARIHPLRPAADLSAAEVAALHDGIRAALRQALANGGSTLRDYRNSYGAGGTNQEHFNA
YDREGRPCPRCGATIIKTVVAQRGTHYCPACQAIPSATTNRRE
NT seq 852 nt NT seq  +upstreamnt  +downstreamnt
atgcccgagttgcctgaagttcaacacaccgccgatagtctggggatacagatcgccggt
gcacggattgcgcgcgtcgaacggctcgactggacccgcatggtggaaaccccatcgccc
gatgagttcatcagactgctcaccggtcggcaggtgcgcggatgggaccgacgcgccaag
tggattctgctctttctcgatgacggttggacgctggcgctgcatctgcgcatgtccggc
agtctgacggttcatcccgccgaggcacaaccggacaaacacacgcatctggcgctgcgc
ctcgaagatggacgccagatattcttcctcgacccgcgcaagtttgggcgcgcgcggctg
ctcgactccgccggtctcgcggcgctcgacgcggcgcacggcgatgagccgctgtcggac
gcattcacggtcgagcgtctggcatccctgctacgtaaccgcaaacgcgcaatcaagccg
ctccttctcgatcaatcagtgatcgccgggatcggaaacatctacgccgacgaggcgctc
tggcgcgcccgcatccacccgctgcgccccgcagccgacctgagcgccgctgaagttgcc
gcactccacgatggcattcgcgcggcgctacggcaggcgctcgccaacggcggcagcacc
ctgcgcgactaccgcaactcctatggcgcgggtggcacgaatcaggagcatttcaacgcc
tacgaccgcgagggacgaccatgcccgcgttgcggcgccacgattatcaagaccgtggtt
gcgcaacggggaacgcactactgcccggcgtgccaggctattccgtcagcaacgaccaac
cgccgcgaatga

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