KEGG   Rickettsia canadensis CA410: RCA_04160Help
Entry
RCA_04160         CDS       T01736                                 

Definition
formamidopyrimidine/5-formyluracil/5-hydroxymethyluracil DNA glycosylase (EC:3.2.2.23)
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
rcc  Rickettsia canadensis CA410
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:rcc00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    RCA_04160
Enzymes [BR:rcc01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     RCA_04160
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     RCA_04160
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
899583..900404
Genome map
AA seq 273 aa AA seqDB search
MPELPEVETLKNSLKDKLIGLIIKNIELKRDNLRYNLSPLLTTEISNTNILNVRRRAKYL
IIDFGNYYSLVIHLGMSGRFTVQPANYKIQKHDHVIFDLNNCEKLIFNDTRRFGMVYSFK
TNFLEEKFFYNLGIEPLSDLLTLEYLKSKLITRTIAIKNLIMDNKIIVGVGNLYASESLH
LARIHPHKLGRNLKDDEIENLIKSIREVLTKAITAGGTTLKNFVNGDSKPGYFTQQLRVY
GREGQKCFNCSSTILKTKNSGRSTFYCKTCQYT
NT seq 822 nt NT seq  +upstreamnt  +downstreamnt
atgccggaactgcctgaagtagaaactcttaaaaactctctgaaagataagctaatcggg
cttattataaaaaatatagagttaaaaagagataatttacgttataatttatctccgctt
ttaactactgaaatctcaaatactaatatactgaatgttaggcgtcgtgcaaaatattta
attatcgattttggtaattattattctttagttatccatctaggtatgagcggtaggttt
acagtgcaacctgctaattataaaattcaaaaacacgatcacgtgatttttgatttaaat
aactgcgaaaagttaattttcaacgatactagacgcttcggaatggtttatagctttaaa
actaattttttagaagagaaatttttttataatctaggaatagagccactttctgattta
ttaacactcgaatatttaaaaagcaaattaattactcgaacaatagcgataaaaaacctg
attatggataataaaattatagtcggagtcggtaatctttatgcttccgaaagtcttcat
ttagctagaattcatccgcataaactaggtagaaatttaaaggatgatgaaatagaaaat
ttaattaaatcgattagagaagtattaactaaagctatcactgccggcggcactactctt
aaaaattttgtaaacggtgatagtaaacctggttattttactcagcaacttagggtttac
ggtagagaaggacaaaaatgcttcaactgctccagtactattctcaaaacaaagaactca
ggaagaagtactttttattgtaaaacttgtcaatatacttga

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