KEGG T02600: RUM

Ruminococcus champanellensis: RUM_02720

Entry

RUM_02720         CDS       T02600

Name

(GenBank) DNA gyrase subunit B

K02470

DNA gyrase subunit B [EC:5.6.2.2]

Organism

rch Ruminococcus champanellensis

Brite

KEGG Orthology (KO) [BR:rch00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rch03032]
    RUM_02720
   03400 DNA repair and recombination proteins [BR:rch03400]
    RUM_02720
Enzymes [BR:rch01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     RUM_02720
DNA replication proteins [BR:rch03032]
Prokaryotic type
  DNA Topoisomerases
   RUM_02720
DNA repair and recombination proteins [BR:rch03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      RUM_02720

SSDB

Motif

Pfam:

DNA_gyraseB DNA_gyraseB_C Toprim HATPase_c HATPase_c_3

Other DBs

NCBI-ProteinID:

CBL16515

UniProt:

D4LA70

Position

complement(294152..296101)

AA seq 649 aa
MSETEQIKPGAQQYDESQIQVLEGLEAVRKRPGMYIGTTGSGGLHHLVYEIVDNSIDEAL
AGYCTHIQVEILPGDIIRVTDNGRGIPTGIHPKEGISAATVVYTVLHAGGKFGGGGYKVA
GGLHGVGASVVNALSEWLELTVKDGSHVHFQRFERGNYAEPLKIIGDTTEHGTSVMFKPD
AEIFEETTVFDYEVLLKRMREQAFLNAGLTIELSDQRDPANPQGEKMCYEGGIRQFIEHI
HKTRGLESLSEQVIYFTGSKGDNAVEIAMQYNDSYNELILSFANNVHTIDGGMHELGFRN
ALTKTLNEYGKRFGLLKDDSKLMGEDVREGLTAIISVKLTDCQFESQTKVKLGNPEIKPF
VESIVSEKLMNYLEENPAVARAIFDKSLAAQRAREAAKKARETARRKTAMESASLPGKLA
DCSERDIEMTEIYIVEGDSAGGSAKEGRDRRYQAILPLWGKMLNVEKARIDKVYCNEKLM
PVVTALGTSIGEDFDISKLRYGKVIIMADADVDGSHIRTLLLTFFFRFMRPLITNGNIYI
AQPPLFRVAKGKTFKYAFSDEERDKYIAQFNAESPNAKVEVQRYKGLGEMDAHQLWDTTM
NPDTRTMIKVEMADAVKADETFSILMGDKVAPRREFIEKNAKYAQNLDI

NT seq 1950 nt +upstreamnt +downstreamnt
atgagcgaaacagaacagataaaaccgggagcacagcagtatgacgaaagccagatccag
gtgctggaggggctggaggctgtacggaagcgtccgggcatgtacatcggcaccaccggt
tccggcggactgcatcacctggtgtacgagatcgtggataactccattgacgaggcgctt
gccgggtattgtacccatattcaggtagaaattctgccgggggatatcatccgggttacg
gataacggacggggcattcccacaggcatccaccccaaggaggggatctccgctgcaacg
gtggtgtatacagtgctgcatgcagggggaaaattcggcggcggcggctacaaggtcgcc
ggcggtctccatggcgtgggagcatccgttgtcaatgcgctgtcggaatggctggagctg
accgtcaaggacgggagccatgtacacttccagcggtttgaacgggggaattatgcggag
cctctgaaaatcatcggggacaccacagagcacggcacctccgtcatgttcaagccggac
gcagagatctttgaggaaaccaccgtgtttgactacgaggtcctcctcaagcgcatgcgg
gaacaggcgtttctgaatgcggggctgaccatcgagctgtcggatcagcgggatccggcg
aatccccagggggagaagatgtgctacgaagggggcatccgccagtttatcgagcatatc
cacaaaacacggggactggaaagcctgtccgagcaggtgatctactttacagggtccaag
ggggacaatgcggtggagatcgccatgcagtacaacgacagctacaacgagctgatcctg
tcctttgccaacaatgtgcataccatcgacgggggcatgcacgagctgggcttccggaat
gcgctgaccaagaccctgaacgaatacggcaagcggttcggcctgctgaaggatgactcc
aagctgatgggggaggacgtgcgggaaggcttgaccgccatcatctccgtcaagctgacg
gactgccagttcgagagccagaccaaggtgaagctgggaaatccggagatcaagcccttt
gtggagtccatcgtgtccgaaaagctcatgaactacctggaggagaatccggcggtggca
cgggcgattttcgacaagagcctggcggcgcagcgtgccagggaggctgccaaaaaggcg
agagaaactgcccggcggaaaaccgctatggaaagcgcaagcctgccgggaaagctggcg
gactgctccgagcgggatattgaaatgacggaaatttacattgtcgagggtgattctgcg
ggaggctccgccaaggagggcagagaccgccggtaccaggcgatccttcccctgtggggc
aagatgctgaacgtggagaaggcacggatcgacaaggtatactgcaacgaaaagctcatg
ccggtggtgactgccctgggcaccagcatcggggaggatttcgacatttccaagctccgg
tacggaaaggtcatcatcatggcggatgcggatgtggacggttcccatatccggacgctg
ctgctgaccttcttcttccggttcatgcgtcccctgatcacaaatggaaatatttacatt
gcccagccgcccctgttccgggtggcaaaggggaagaccttcaagtatgccttctccgac
gaggagcgtgacaaatacatcgcccagttcaatgcggaatcccccaacgccaaggtggag
gtgcagcggtacaagggtcttggcgagatggacgcacaccagctctgggacaccaccatg
aacccggacaccagaaccatgatcaaggtggaaatggcggacgcagtgaaggcggacgag
accttttccatcctcatgggggataaggttgcccccagacgggaatttatcgagaagaat
gcaaaatacgcacagaatctggatatttaa

All links

Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (15)   

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