KEGG   Ruminococcus champanellensis: RUM_03270
Entry
RUM_03270         CDS       T02600                                 
Name
(GenBank) RNase HI
  KO
K03469  ribonuclease HI [EC:3.1.26.4]
Organism
rch  Ruminococcus champanellensis
Pathway
rch03030  DNA replication
Brite
KEGG Orthology (KO) [BR:rch00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    RUM_03270
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rch03032]
    RUM_03270
Enzymes [BR:rch01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.4  ribonuclease H
     RUM_03270
DNA replication proteins [BR:rch03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RNase H
    RUM_03270
 Prokaryotic type
   Elongation factors (bacterial)
    RNase H
     RUM_03270
   Elongation factors (archaeal)
     RUM_03270
SSDB
Motif
Pfam: RNase_H RVT_3
Other DBs
NCBI-ProteinID: CBL16566
UniProt: D4LAC1
Position
357704..358138
AA seq 144 aa
MKHVDIFTDGACSGNPGPGGYGVVLRFGTVEKELSGGEPNTTNNRMELMGVITGLSALKE
PCDVTLTTDSKYVVDSITKGWVYGWKRKGWIKSDKKPALNVDLWERLLPLLERHQVQFVW
VKGHAGHPENERCDALAVAQRDRF
NT seq 435 nt   +upstreamnt  +downstreamnt
atgaagcatgtggatatttttacggacggggcatgcagcggcaatccgggccccggaggc
tacggggtggtgctccggttcggcacggtggaaaaggagctttccggcggagagccaaac
accaccaacaaccggatggagctgatgggggtcatcaccggcctgtccgccctgaaggag
ccctgtgacgtgacccttaccaccgacagcaaatatgtggtggacagcatcaccaagggc
tgggtctacggctggaagcggaagggctggatcaagtccgacaagaagccggcgctgaac
gtggatctgtgggagcggctgctgcccctgctggagcggcaccaggtgcagtttgtctgg
gtcaaggggcatgcgggacacccggaaaacgagcgctgcgatgccctggctgtggcacag
cgggatcggttctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (12)   

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