KEGG   Ruminococcus champanellensis: RUM_13580
Entry
RUM_13580         CDS       T02600                                 
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase
  KO
K07258  serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
Organism
rch  Ruminococcus champanellensis
Pathway
rch00550  Peptidoglycan biosynthesis
rch01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:rch00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    RUM_13580
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:rch01002]
    RUM_13580
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:rch01011]
    RUM_13580
Enzymes [BR:rch01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.16  Serine-type carboxypeptidases
    3.4.16.4  serine-type D-Ala-D-Ala carboxypeptidase
     RUM_13580
Peptidases and inhibitors [BR:rch01002]
 Serine peptidases
  Family S11: D-Ala-D-Ala carboxypeptidase A family
   RUM_13580
Peptidoglycan biosynthesis and degradation proteins [BR:rch01011]
 Peptidoglycan biosynthesis and degradation
  DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
   RUM_13580
SSDB
Motif
Pfam: Peptidase_S11 PBP5_C Beta-lactamase2 Peptidase_S13 Transpeptidase
Other DBs
NCBI-ProteinID: CBL17480
UniProt: D4LCY5
Position
complement(1492289..1493425)
AA seq 378 aa
MKKWLSLMLAVLCCLHLCCPAVHAADPLGISAQAYVLMEADTGKVLLSKNGDEKRPIAST
TKIMTTLLCLESGGLDDWFVVDPEAIRVEGSSMGLQEGDVVTKRMLCYGMLLPSGNDAAN
ATAVRLAGSIPEFAKLMNARAARIGMTHTCFVTPSGLDAEGHGASVRDMGLLARTAMQNP
DFRAICSQSRAEVCFGNPPYNRWLKNTNKLLTMYEGVVGVKTGFTDAAGRCLVSFCERDG
VSLLCVTLHAKDDWNDHMKLYDYGFAHVVSQPVEPPDALSVSVVGGTADTVALRTRDPLS
VGTDNGDLRQLMVQVQVEPFLYAPVPENARVGNLAYYYEGRHVADVPLYTVDAVAAQEQE
PETPGFWQALLARIRSWF
NT seq 1137 nt   +upstreamnt  +downstreamnt
atgaaaaaatggctgagtctgatgctggcggtactgtgctgcctgcatctttgctgtccg
gcggtgcatgctgccgaccctctgggcatttccgcccaggcttatgtgctgatggaggcg
gacaccggcaaggtgctgttgtccaaaaacggggacgaaaagcgtcccatcgccagcacc
accaagatcatgaccaccctgctgtgcctggaaagcggcggactggatgactggttcgtg
gtggatccggaagccatccgggtggagggctcctccatgggactccaggagggggacgtg
gtcaccaaacgcatgctctgctatggcatgctgctgccctccggcaacgatgcagccaat
gccacagccgtccggctggctggctccatcccggaatttgcaaagctgatgaatgcacgg
gctgcccggatcggcatgacccacacctgctttgtgaccccctccggtctggatgcggag
ggacacggggcatccgtccgggatatgggactgctggcacggacagccatgcagaacccg
gactttcgtgccatttgcagccagtcccgggcagaggtgtgcttcggcaatccgccctac
aaccggtggctgaaaaacaccaacaagctgctgaccatgtatgagggcgtggtgggcgtc
aaaaccggctttacggatgcagcaggcagatgcctggtgtccttctgtgaacgggacggg
gtatccctgctctgtgtgacgctgcatgccaaggacgactggaatgaccacatgaagctg
tacgactacggctttgcccatgtggtatcccagcctgtggagccgccggatgccctgtcc
gtcagcgtggtgggcggcacggcggataccgttgccctgcgcacccgggatcccctgtcc
gttggcacggataacggagatctgcggcagttgatggtgcaggtacaggtggaacccttt
ttgtatgcccctgtaccggagaatgcccgggtgggcaatctggcttattattatgaagga
cggcacgtcgccgatgtgcccctgtatacggtagatgcggttgctgcccaggagcaggaa
ccggaaacccccggcttctggcaggcgttgcttgcccgcatccgaagctggttctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (17)   

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