KEGG   Rickettsia canadensis McKiel: A1E_04515Help
Entry
A1E_04515         CDS       T00603                                 

Definition
formamidopyrimidine-DNA glycosylase
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
rcm  Rickettsia canadensis McKiel
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:rcm00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    A1E_04515
Enzymes [BR:rcm01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     A1E_04515
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     A1E_04515
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
909507..910328
Genome map
AA seq 273 aa AA seqDB search
MPELPEVETLKNSLKDKLIGLIIKNIELKRDNLRYNLSPLLTTEILNTNILNVRRRAKYL
IIDFGNYYSLVIHLGMSGRFTVQPANYKIQKHDHVIFDLNNCEKLIFNDTRRFGMVYSFK
TNFLEEKFFYNLGIEPLSDLLTLEYLKSKLITRTIAIKNLIMDNKIIVGVGNLYASESLH
LARIHPHKLGRNLKDDEIENLIKSIREVLTKAITAGGTTLKNFVNGDSKPGYFTQQLRVY
GREGQKCFNCSSTILKTKNSGRSTFYCKTCQYT
NT seq 822 nt NT seq  +upstreamnt  +downstreamnt
atgccggaactgcctgaagtagaaactcttaaaaactctctgaaagataagctaatcggg
cttattataaaaaatatagagttaaaaagagataatttacgttataatttatctccgctt
ttaactactgaaatcttaaatactaatatactgaatgttaggcgtcgtgcaaaatattta
attatcgattttggtaattattattctttagttatccatctaggtatgagcggtaggttt
acagtacaacctgctaattataaaattcaaaaacacgatcacgtgatttttgatttaaat
aactgcgaaaagttaattttcaacgatactagacgcttcggaatggtttatagctttaaa
actaattttttagaagagaaatttttttataatctaggaatagagccactttctgattta
ttaacactcgaatatttaaaaagcaaattaattactcgaacaatagcgataaaaaacctg
attatggataataaaattatagttggagtcggtaatctttatgcttccgaaagtcttcat
ttagctagaattcatccgcataaactaggtagaaatttaaaggatgatgaaatagaaaat
ttaattaaatcgattagagaagtattaactaaagctatcactgccggcggcactactctt
aaaaattttgtaaacggtgatagtaaacctggttattttactcagcaacttagggtttac
ggtagagaaggacaaaaatgcttcaactgctccagtactattctcaaaacaaagaactca
ggaagaagtactttttattgtaaaacttgtcaatatacttga

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