KEGG   Rhodobacter capsulatus: RCAP_rcc00225
Entry
RCAP_rcc00225     CDS       T01213                                 
Symbol
alkB
Name
(GenBank) alpha-ketoglutarate-dependent dioxygenase AlkB
  KO
K03919  DNA oxidative demethylase [EC:1.14.11.33]
Organism
rcp  Rhodobacter capsulatus
Brite
KEGG Orthology (KO) [BR:rcp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rcp03400]
    RCAP_rcc00225 (alkB)
Enzymes [BR:rcp01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.33  DNA oxidative demethylase
     RCAP_rcc00225 (alkB)
DNA repair and recombination proteins [BR:rcp03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   Direct repair
    RCAP_rcc00225 (alkB)
SSDB
Motif
Pfam: 2OG-FeII_Oxy_2 2OG-FeII_Oxy
Other DBs
NCBI-ProteinID: ADE83990
UniProt: D5ALD4
Position
262357..262992
AA seq 211 aa
MPQSAKSVQKRPDPQEIRGFRHYPGWLVSTEQAALVEDLRAVVAAAPLFSPMTPYGRPMS
VRMTSAGRFGWVSDRRGYRYSETHPSGGAWPPIPESVLGIWRAVSGSDRSPECCLVNFYA
EKARMGLHQDRDEADFAQPVVSISLGDDGLFRIGNETRGGATQSLWLRSGDVLVMGGAAR
LLYHGIDRIAPGTSTLLPQGGRINLTLRVVT
NT seq 636 nt   +upstreamnt  +downstreamnt
atgccacaatccgccaaatcggtgcaaaaacgcccggatccgcaggaaatccgcggcttc
cggcattaccccggctggctggtgtccaccgaacaggcggcgctggtcgaggacctgcgc
gcggtggtcgccgccgcgccgctcttctcgccgatgacgccctacgggcggccgatgtcg
gtgcggatgacctcggccgggcggttcggctgggtgagtgatcggcgcggctatcgctac
agcgaaacgcacccctcgggcggggcctggccgccgattccggaaagcgttctgggcatc
tggcgggctgtgtcggggtctgatcgcagcccggaatgctgtctggtgaatttctatgcc
gaaaaggcgcggatgggcctgcatcaggaccgcgacgaggcggattttgcccagcccgtg
gtgtcgatttcgctcggcgatgacgggctgttccgcatcggcaatgaaacgcggggcggg
gcgacgcaaagcctctggctgcgctcgggcgatgtgctggtgatgggcggtgccgcgcgg
ctgctctaccacggcatcgaccggatcgcgcccgggacatcgacgctcttgccgcagggc
gggcggatcaatctgaccttgcgcgtggtgacatag

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