KEGG   Ricinus communis (castor bean): 8258354
Entry
8258354           CDS       T01087                                 
Name
(RefSeq) serine/threonine-protein phosphatase PP1 isozyme 3
  KO
K06269  serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
Organism
rcu  Ricinus communis (castor bean)
Pathway
rcu03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:rcu00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    8258354
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:rcu01009]
    8258354
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rcu03021]
    8258354
   03019 Messenger RNA biogenesis [BR:rcu03019]
    8258354
   03041 Spliceosome [BR:rcu03041]
    8258354
Enzymes [BR:rcu01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.3  Phosphoric-monoester hydrolases
    3.1.3.16  protein-serine/threonine phosphatase
     8258354
Protein phosphatases and associated proteins [BR:rcu01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    Catalytic subunits
     8258354
Transcription machinery [BR:rcu03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     8258354
Messenger RNA biogenesis [BR:rcu03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     8258354
Spliceosome [BR:rcu03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   Other SAPs
    8258354
SSDB
Motif
Pfam: Metallophos STPPase_N
Other DBs
NCBI-GeneID: 8258354
NCBI-ProteinID: XP_002531533
Position
9:4254561..4257892
AA seq 324 aa
MQRAVLDGVIYRLLEVRGKPGKQVQLSENEIRQLCFTSREIFLKQPNLLELEAPIKICGD
IHGQYPDLLKLFEYGGLPPRANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGN
HECASVNRIYGFYDECKRRFNVRIWKFFTDCFNCLPVAALIDEKILCMHGGLSPDLRNLD
QIRSLQRPAVVPESGLLCDLLWSDPSKDIQGWGINERGVSYTFGADRVVEFLQKHDLDLI
CRAHQVVEDGYEFFANRQLVTIFSAPNYCGEFDNAGAMMSVDENLLCSFQILKPVDKKPK
FSFGSMATAKPSTNSTKIKSLLKV
NT seq 975 nt   +upstreamnt  +downstreamnt
atgcagcgtgcagttcttgatggtgtgatttataggttgcttgaagttagaggcaagcca
gggaagcaggtccagctttctgagaacgaaattaggcagctctgtttcacttccagggag
attttcttgaaacagccaaatctcttggagcttgaagctcctatcaaaatctgtggagat
atacacggacaatatcctgatcttctgaagttattcgagtatggaggcttacctcctcga
gccaactatttattcttaggggattatgtagatcgaggaaagcaaagtctggaaactata
tgccttcttcttgcatataaaataaaatatcccgagaactttttcttactgagaggaaac
catgaatgtgcttctgtaaaccgtatatatggattttatgatgagtgcaaacgaagattc
aatgtcagaatatggaaattttttacagattgtttcaattgcttgcccgtggcagccctt
attgatgaaaagattctgtgcatgcatggtggactttctcctgatcttcgaaatttggat
cagattaggagtttacagcgacctgctgttgttcctgagtctggtttattatgtgatctt
ctatggtctgatcctagtaaagacattcaaggttggggcataaatgaaaggggtgtttca
tacacttttggtgctgatagggtcgttgaatttctgcagaagcatgatcttgatttaatt
tgtcgagcccatcaggttgtggaagatggatatgagtttttcgcaaacagacaacttgta
accatattttcagctccgaattattgtggagagtttgataatgctggcgccatgatgagt
gtggatgagaatttgctatgttccttccaaattctgaaacctgttgataagaagccaaag
tttagttttgggagcatggctactgctaagcctagcaccaattcaacaaaaatcaagtct
cttttaaaagtataa

  All links  
Ontology (6)   
   KEGG BRITE (6)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (34)   
   KEGG ORTHOLOGY (1)   
   RefGene (30)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (47)   

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