KEGG   Ricinus communis (castor bean): 8262997
Entry
8262997           CDS       T01087                                 
Name
(RefSeq) serine hydroxymethyltransferase 7
  KO
K00600  glycine hydroxymethyltransferase [EC:2.1.2.1]
Organism
rcu  Ricinus communis (castor bean)
Pathway
rcu00260  Glycine, serine and threonine metabolism
rcu00460  Cyanoamino acid metabolism
rcu00630  Glyoxylate and dicarboxylate metabolism
rcu00670  One carbon pool by folate
rcu01100  Metabolic pathways
rcu01110  Biosynthesis of secondary metabolites
rcu01200  Carbon metabolism
rcu01230  Biosynthesis of amino acids
rcu01240  Biosynthesis of cofactors
Module
rcu_M00532  Photorespiration
Brite
KEGG Orthology (KO) [BR:rcu00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00630 Glyoxylate and dicarboxylate metabolism
    8262997
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    8262997
  09106 Metabolism of other amino acids
   00460 Cyanoamino acid metabolism
    8262997
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    8262997
Enzymes [BR:rcu01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.2  Hydroxymethyl-, formyl- and related transferases
    2.1.2.1  glycine hydroxymethyltransferase
     8262997
SSDB
Motif
Pfam: SHMT Beta_elim_lyase DegT_DnrJ_EryC1
Other DBs
NCBI-GeneID: 8262997
NCBI-ProteinID: XP_002513846
UniProt: B9RJC7
Position
2:complement(6457036..6461621)
AA seq 567 aa
MDLSQSQSGLSLGFHSHTSSNPIPLQLLDQKEENFNLILKNDNNDDNLTEEEENFSILGH
PMCLKRQRGGDGQSSSSSSSSPNPSKRTAIEPPGLESRRAMVRAWGNQPLPFADPEIHEI
MEKEKQRQIKGIELIASENFVCRAVMEALGSHLTNKYSEGLPGSRYYTGNQLIDQIESIC
CNRALVAFGLDSDKWGVNVQPYSCTSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYCVP
GGKKVSASSIFFESLPYKVNPQTGYIDYDKMEEKAMDFRPKILICGGSSYPREWDYARFR
QVADKIGAVLMCDMAHISGLVAAKECASPFDYCDVVTSTTHKSLRGPRGGIIFFRKGQKS
RKQGNLLNHGDSSSHYDFEERINFAVHPSLQGGPHNNHIAALAIALKQVASPEYRTYMQQ
VKKNARTLASALLRRKCRLVTGGTDNHLLLWDLTTLGLAGKNYEKVCEMCHITLNKSAIF
GENGAICLGGVRIGTPAMTSRGCLEGDFETIADFLLRAAQIACAIQREHGKIQKEFLKGL
QNNRDIVELRNRVETFASQFAMPGFDF
NT seq 1704 nt   +upstreamnt  +downstreamnt
atggatttatcgcaatcccaatcgggtctatcgctagggtttcactcacacacatcatcg
aatccaattcctttacagttacttgaccaaaaagaagagaatttcaacctgattttgaaa
aatgataataatgatgataatttaactgaggaagaggagaattttagcattttaggtcac
ccaatgtgtctgaagaggcaaagaggaggcgatggtcaatcatcctcatcatcatcgtca
tcacctaacccttccaagcgaactgccatcgaaccacctgggcttgagtctcggcgagcc
atggttcgagcttgggggaaccagccacttccttttgcagacccagagattcatgaaatt
atggagaaagagaagcagaggcaaattaaaggtattgaacttatagcttctgagaatttt
gtttgtcgggctgttatggaagctcttggtagccacttgactaataaatactctgaggga
ttgcctgggtcgagatattacacgggtaatcagcttattgaccagatagaatcaatatgt
tgtaatcgggcactagtggcgtttgggcttgattctgataaatggggtgtcaatgtgcag
ccgtattcatgtacttctgcaaattttgctgtttacactgggcttttgttacctggggat
aggattatgggtttggattctccttctggcgggcatttgagccatgggtattgtgttcct
ggaggtaaaaaggtgtctgcttcgtccattttctttgagagtctgccttataaagtgaat
cctcaaactggctatattgattatgataagatggaggagaaggctatggattttagaccc
aagatacttatttgtggtggaagctcatacccgagggaatgggattatgccaggtttagg
caagttgctgataagattggagcggtgctaatgtgtgacatggctcatattagtggcctt
gtagcagctaaggagtgtgcaagtccatttgattattgtgatgttgttacttccacgact
cataaaagtcttcgaggtccaagaggaggaataatttttttccggaagggccaaaaatca
aggaagcaaggaaatcttcttaatcatggtgatagtagtagccattatgattttgaagaa
aggataaactttgcagttcatccatcattacaaggtggtcctcacaataatcacattgct
gctcttgctatagccttaaaacaagtagctagcccagagtatagaacatatatgcaacag
gtgaagaaaaacgcccgcacgttagcatctgccttattgagaagaaaatgcagattggtg
actgggggtactgacaaccatttgttgctatgggatctaactactcttggcttggcaggg
aagaactatgagaaagtatgtgaaatgtgtcacatcactttaaataaaagtgctatattt
ggtgagaatggtgctatctgtcttggtggggtgagaattggcactcctgctatgacatca
agaggctgtttagagggtgattttgaaacgattgctgactttcttcttagggcagctcaa
atcgcgtgtgcgatacaaagggaacatgggaaaattcagaaagagtttctcaagggtcta
caaaacaatagagacattgttgagctccgaaatcgcgttgagacatttgcttcccagttt
gcaatgccaggatttgacttttga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (14)   
   KEGG PATHWAY (9)   
   KEGG MODULE (5)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (43)   

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