KEGG   Ricinus communis (castor bean): 8267685
Entry
8267685           CDS       T01087                                 
Name
(RefSeq) enhancer of mRNA-decapping protein 4
  KO
K12616  enhancer of mRNA-decapping protein 4
Organism
rcu  Ricinus communis (castor bean)
Pathway
rcu03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:rcu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    8267685
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rcu03019]
    8267685
Messenger RNA biogenesis [BR:rcu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     8267685
  mRNA degradation factors
   5'-3' decay
    Decapping complex
     8267685
SSDB
Motif
Pfam: EDC4_C Ge1_WD40 WD40 DUF445 FHA_2
Other DBs
NCBI-GeneID: 8267685
NCBI-ProteinID: XP_015581751
Position
1:complement(13167522..13178068)
AA seq 1368 aa
MASPNQQQTPTATPPTPPQFDMHKLFMPTTSTPPPLPPTTTPSPSPPPPPQYNPTLIFPS
PATTSYPPPTLSNFPFHQFPQQFPQQFSPSPPTFSHAPPPPPPQQQQQQPHRSLSYPTPP
LQPQTPSPRNNNIDRSGAEIMALLRPPPPPPPIQEQPEGSGTLVIPGGVVGPIRMASSKM
PKGRRIGSGEVAVCYDVDVRLQGEVQPQLEVTPITKYNSDPQLCLGRQIAVNKSYICYGL
KQGNIRILNINTALRSLFRSNSQRVTDMAFFAEDVHLLASAGIDGRINVWKISEGPDEED
KPQITGKAVIAIQIVGEGEIKNPRVCWHCYKQEILVVGVGKRVLRIDTNKVGKAGVYSSE
APLLCPVDKVIDGIQLVGKHDGEVTDLSMCQWMTTRLVSASMDGTIKIWEDLKASPLVVL
RPHDGQSVYSATFLTASNRPDHIILITAGSQNREVKIWVSDKEEGWLLPSDGDSLNCTQT
LELKSSAEPRIEEAFFNQVVALSQVGLLLLANAKRNAIYAIHLDYGPNPAATRMDYISEF
TVTMPILSLTGTSDVLHGQSVAQIYCVQTAAIQQYTLDLCQCLPPLLENVGLENSDSNIS
LDLANVEGVSALDSHGKNFSNVPLSSVSIDAVTSQDIPSSSNDSKPLALAPSTSDADITC
VQPSPLSIKSRGMTDVNLSSRLKSGPPSGEQGSNQPVIDNSVDQQMDTIRANISDVPSLG
SDLRNDDKKGTLDDNSSMLDPPVMFKHPTHLVTPSEILMGVPPNNNDIKTEEANIQDVVV
NSDVSNAEVEVKVVGENKSTHNGEFGLRGEPKSRVPENKEKFFCSQASDLGIEVARECSA
ISAETYTMEEPQQVDGVDVPEYHAQPSHISEDEVHDSTKNVLEKVTESTMPTTVQQSTPS
TKAKKQKAKSSQASGPYSPSPSVFNSTDSSNEPAGTSETAFPQIFAMQEMLSQLIATQRE
MQKQMSNMVAVPVSKECRRLEAALGRSIEKAVKANTDALWARFQEENAKNEKLLRDRTQQ
ISSLIANFINKDLTAMLEKAVKKELASIGPAVARTISPVLEKTISSAIAESFQRGVGDKA
VNQLEKSVNTKLEATVARQIQAQFQTSGKQALQDSLKAGLEASVIPAFEMSCKAMFEQVD
ATFRKGMVEHTAAAQQHFESAHSSLALALRETINSASSLTQTLSGEFAESQRKLLALVAA
GANSNAANPLVTQLSNGPLAGLHEKVETHVDPTKELSRLISEHKYGEAFTIALQRSDVYI
VSWLCSQVDLRGILAMVPLPLSQGVLLSLLQQLACDVSKDTARKLAWMTDVAAAINPADQ
MISMHVRPIFEQVYQILHQLRNSPAVTGTDLSTIRVLMHVINSVLVTC
NT seq 4107 nt   +upstreamnt  +downstreamnt
atggcatccccaaatcaacaacaaaccccaacagcaacaccaccaacgccaccccaattc
gacatgcacaaattgttcatgcccacaacttcaacaccaccaccactaccaccgacaaca
acgccatcaccgtcaccgcccccaccaccacaatataaccctactcttatatttccttcc
ccagccactacttcttatcctccccctactctctctaacttcccctttcatcaattcccc
caacaatttccccagcaattttccccctcgcctcctactttctctcacgctcctcctcct
cctcctcctcagcagcagcagcagcagccgcaccgctctctttcctaccctacccctcct
cttcaaccccaaaccccttctcctcgcaataacaacatcgaccgcagtggtgctgaaatc
atggccctcctccgcccccctccccctccgccgccaattcaagaacagccggaaggaagt
gggacccttgtgattccgggtggtgttgtgggacctattaggatggcaagtagtaagatg
ccaaagggaagaaggatagggagtggtgaagtagcagtgtgttatgatgtggatgttagg
ttacaaggggaagtgcagcctcaacttgaggttacacctattactaagtacaactctgat
cctcagttgtgcttaggaaggcaaattgctgttaataaatcttatatatgttatgggtta
aagcagggtaatattaggattcttaatattaatactgctctccgctccttgtttcgctcc
aactctcagagggttactgatatggctttctttgctgaggatgttcatctcttggctagt
gctggcatagatggacggattaatgtctggaaaatttctgaaggtccagatgaggaagat
aagccacaaattacaggaaaggctgttattgccattcaaatagttggagagggagagatt
aaaaatccaagagtttgttggcattgctacaaacaagaaattttggttgttggagttggt
aagcgtgttctcagaattgatactaacaaagttggaaaggctggagtatattcatcagag
gcacctcttttatgtcctgttgacaaagtgattgatggtatccaattggttggcaaacat
gatggagaagtgactgatttatcaatgtgccagtggatgactacccgtttggtttctgct
tctatggatggaacaattaagatctgggaggatctcaaggcatcaccgcttgtggtactg
agaccacatgatggccagtctgtttactcagcaacattcttgactgctagcaaccggcca
gatcacatcatacttattacagcagggtcccagaatcgagaagtgaagatttgggtctca
gacaaagaagagggctggctgttacccagtgatggcgattcattgaattgcactcagact
ctagagctcaagagttcagctgaacctcgaatagaggaagcattcttcaatcaagttgta
gctctgtcccaagtgggtctcctcttacttgcaaatgctaagaggaatgcaatatatgct
atacacctagactacggtcctaatccagcagcaacccgcatggattacatatcggagttt
actgtcaccatgcctatcttgagtttaacaggaactagtgatgttttacatggacaatct
gttgctcagatttattgtgtccagacagcggctattcagcagtatactttggatttatgc
cagtgcttgccgccactcttggagaatgttggtttagagaattcggattccaatatttca
cttgatctagctaatgttgaaggagtttctgctttggactcacatggaaagaacttctcg
aatgttcctctaagctctgtttcaattgatgcagttacctcgcaagatattccctcttca
agtaatgactccaaacctcttgctttggccccttcgactagtgatgctgacatcacttgt
gttcaaccatctcctctttccataaaaagtaggggtatgactgatgttaatctctcatca
agacttaagtcaggccctccatctggtgagcaaggttcaaatcagccagtcattgacaat
tcagttgaccagcaaatggatactattcgtgcaaatatatcggatgttccttctttgggt
agtgacttaaggaatgatgacaaaaaaggtacactagatgataactctagcatgcttgat
ccgcctgtaatgtttaaacacccaacccatcttgtaactccttctgagattttaatgggt
gttcctcctaataataatgatatcaagactgaggaagcaaatattcaagatgtagttgtc
aatagtgatgtcagtaatgcagaagtggaggttaaagtagttggtgaaaataaatctact
cacaatggtgaatttggcctccgaggagaacctaaaagtcgtgttcctgaaaataaggag
aagttcttttgttcccaggcttcagatcttggtattgaagttgccagggaatgtagtgcc
atatcagcagaaacttatactatggaggaacctcagcaagttgatggtgttgatgtgccc
gaatatcatgcccaaccctctcatataagtgaggacgaagtccatgactccaccaaaaat
gtactggagaaagttaccgagtcaactatgcccacaacagttcagcaatcaacaccaagt
acgaaggcaaagaagcagaaggcgaaaagttctcaagcatcaggcccatattctccatct
ccaagtgtctttaattcaacagactcttctaatgaaccggctggaacttcagaaactgcc
tttcctcaaatatttgcaatgcaggagatgttaagtcagttaatagccacacaaagagaa
atgcagaagcagatgtcaaatatggttgctgtccctgtttcaaaagaatgtagaagactg
gaggctgctttagggcggagcattgagaaagctgtcaaggcaaatactgatgcactgtgg
gctcgttttcaagaagaaaatgcaaagaatgagaagttattgcgggatcgcacacagcaa
atatcaagtctgattgctaactttatcaacaaggacttgacagccatgttggagaaagca
gtgaaaaaagaattagcttcaattggaccagctgtagctcgtactatctctccagtcctt
gagaaaacaatatcttcagctattgcggagtcattccagagaggagtaggtgataaggca
gtaaatcaactggagaaatcagttaatacaaaacttgaagccactgttgctaggcaaatt
caagcacaatttcaaacttctggaaagcaggctctccaggattccttgaaggctggcctg
gaagcttcagttatccctgcctttgagatgtcgtgtaaagctatgtttgagcaagtagat
gccacctttaggaaagggatggttgaacatacagctgcagctcagcaacattttgaatct
gcacattcttcattggcccttgctttaagggaaaccatcaactcagcatcctcgttgacc
caaaccctgagtggggagtttgctgaaagtcaaaggaagctgttagctcttgtggctgct
ggtgcaaactcaaatgctgcaaaccccctggttacgcaactgagcaatggccctttggct
ggtctccatgaaaaggttgagactcatgtggatccaacaaaggagttatcaagattgata
tctgaacacaaatatggcgaggctttcaccatcgccctacaaagaagtgatgtgtacatt
gtctcctggttatgctctcaggttgatttgcgagggattctagcaatggttccactcccc
ttaagccaaggagtgttgctctctcttctgcagcagttggcctgtgacgtaagcaaggat
acagctcgaaagcttgcttggatgacagacgtggcagctgccataaacccagctgaccaa
atgatctcaatgcatgtgcggccaatctttgagcaagtataccagattttgcatcagcta
cgcaactcacctgctgttacgggtactgacctctcaactatccgggttctcatgcatgtc
atcaactccgtgcttgttacctgttga

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