KEGG   Ricinus communis (castor bean): 8269656
Entry
8269656           CDS       T01087                                 
Name
(RefSeq) polygalacturonase
  KO
K01184  polygalacturonase [EC:3.2.1.15]
Organism
rcu  Ricinus communis (castor bean)
Pathway
rcu00040  Pentose and glucuronate interconversions
rcu01100  Metabolic pathways
Module
rcu_M00081  Pectin degradation
Brite
KEGG Orthology (KO) [BR:rcu00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    8269656
Enzymes [BR:rcu01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.1  Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
    3.2.1.15  endo-polygalacturonase
     8269656
SSDB
Motif
Pfam: Glyco_hydro_28 Pectate_lyase_3 Beta_helix Nab2-zf4 NosD
Other DBs
NCBI-GeneID: 8269656
NCBI-ProteinID: XP_002529090
UniProt: B9SSX1
Position
1:complement(12150026..12152650)
AA seq 393 aa
MANTRQSSFSFLALLILLFTSSLATAAQYNVLSYGAKPDGRTDSTKAFLAAWTQACGSTK
PPTIYVPSGKFFLKDLSFGGPCKNNAILFRIDGTLVAPSDYKVIGNAGYWLYFQHVNGVT
ISGGILDGQGSGLWACKASGKNCPSGATSLGFSNSKNIAIKGLTSQNSQMFHIVINGCQN
VKVQGVTVSASGDSPNTDGIHVQQSGGVTILNSKIRTGDDCISIGPGATNLWIENIACGP
GHGISIGSLGKDLQEAGVQNVTVKTVTFTGTQNGVRIKSWGRPSSGFARNILFQHAIMTN
VQNPIVIDQNYCPDNKNCPGQESGVKISGVTYQDIHGTSATEVAVKFDCSKKEPCTGIKL
EDVKLTYKNQPADASCNNADGTASGFVQPSSCL
NT seq 1182 nt   +upstreamnt  +downstreamnt
atggccaatacaagacagagctctttttcatttcttgcacttctcatccttctctttacc
tcatctttagctacagcagcacaatataatgttttgagttatggggctaaacctgatggc
agaactgactcaaccaaagcctttcttgctgcatggacacaagcttgtggctcaactaag
ccaccaactatctatgtgccgtcagggaaattctttctgaaagatttgtcttttgggggt
ccatgcaagaataatgcaatcttgtttcgtatagatggcacccttgttgctccatcagat
tataaggttattggtaatgctggttactggctttactttcagcatgtgaatggtgttact
atctcgggcggaattcttgatggacaaggttctggtttatgggcttgcaaagcctctggc
aagaattgccctagtggtgccacgtcactgggattttccaactcgaagaatattgcgatt
aaaggattgacttcacaaaatagccaaatgttccatattgtcatcaatggttgccagaac
gtgaaagtgcaaggggttacagtttcagcctctggcgacagccctaacaccgacggcatt
catgtacaacaatcaggcggtgtaacgatcttaaactccaagattagaactggcgatgat
tgcatctcaatcggtcctggtgccactaacttgtggattgaaaatatagcatgtggtcct
ggccacggaatcagtattggtagtttaggaaaggaccttcaagaggctggtgtacaaaat
gtgacagttaaaacagttacattcactggtactcaaaatggagtgagaattaaatcttgg
ggaagacctagtagtgggtttgcaagaaacatacttttccaacatgctatcatgaccaat
gtccagaatccaattgtgatcgatcaaaattattgccccgacaacaaaaattgccctggt
caggagtctggtgttaagattagcggcgtcacgtaccaagacatccatggaacatcagca
acagaagtagcagtgaaatttgactgcagcaaaaaggaaccgtgcactggtatcaaactg
gaagatgtgaaattgacatacaagaatcagccagcagatgcttcttgcaacaatgccgat
ggaacagcttctggtttcgttcaacccagtagttgtctgtag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (2)   
   KEGG MODULE (1)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (29)   

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