KEGG   Ricinus communis (castor bean): 8276040
Entry
8276040           CDS       T01087                                 
Name
(RefSeq) tyrosine--tRNA ligase 1, cytoplasmic
  KO
K01866  tyrosyl-tRNA synthetase [EC:6.1.1.1]
Organism
rcu  Ricinus communis (castor bean)
Pathway
rcu00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:rcu00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    8276040
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:rcu01007]
    8276040
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:rcu03016]
    8276040
   03029 Mitochondrial biogenesis [BR:rcu03029]
    8276040
Enzymes [BR:rcu01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.1  tyrosine---tRNA ligase
     8276040
Amino acid related enzymes [BR:rcu01007]
 Aminoacyl-tRNA synthetase
  Class I (A)
   8276040
Transfer RNA biogenesis [BR:rcu03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Other AARSs
    8276040
 Prokaryotic type
    8276040
Mitochondrial biogenesis [BR:rcu03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   Other mitochondrial DNA transcription and translation factors
    8276040
SSDB
Motif
Pfam: tRNA-synt_1b
Other DBs
NCBI-GeneID: 8276040
NCBI-ProteinID: XP_015573604
Position
5:complement(29415834..29419702)
AA seq 381 aa
MSTEEDKIAPSEEMQSLSVNSASPSSSSQTMSPEERFQIVRGIGEECIQEDELLNLLTKK
PQPICYDGFEPSGRMHIAQGVMKTINVNKLTSAGCKVKIWIADWFAQLNNKMGGDLKKIQ
TVGRYFVEIWKAAGMDLDGGKVEFLWSSEEINSRAAEYWPLVMDIARRNKLPRILRCVQI
MGRSEQDELTAAQILYPCMQCADIFFLKADICQLGMDQRKVNVLAREYCDDIKRKNKPII
LSHHMLPGLQEGQDKMSKSDPSSSIFMEDEEAEVNLKIKKAFCPPQQVEKNPCLEYLKYI
IFPWFNEFKVERSEKNGGEKTYESFEKLVADYESGELHPGDLKPALSKAINMILKPVRDH
FNNDANAKDLLKRVKGYRVTR
NT seq 1146 nt   +upstreamnt  +downstreamnt
atgtcaactgaggaagacaaaatcgcgccatctgaagaaatgcagtctctctctgttaac
tctgcgtctccctcatcttcttctcagactatgagtccagaggagagatttcaaattgta
agaggcattggagaagagtgtatacaagaagatgagctccttaatcttcttaccaaaaag
ccccaacccatttgctatgatgggtttgagccttctggtagaatgcacattgcccagggt
gttatgaagaccataaatgtaaataaactgacttcggctggttgcaaggtcaaaatatgg
attgctgattggtttgcccagctaaacaacaaaatgggaggtgatctgaagaaaatccaa
acagtagggcgttattttgttgagatatggaaggcggctggcatggatctcgatggaggt
aaagtagaatttctgtggtcttctgaggaaattaactccagggcagctgagtactggcct
cttgtaatggacattgctcgtaggaacaagcttcccaggattttgaggtgtgttcaaata
atgggtcgtagcgaacaggacgagctgacagcagcccagattctctatccatgcatgcag
tgtgctgacatattttttctcaaggctgacatttgtcagttgggcatggatcagaggaaa
gtgaatgttcttgcacgagaatactgtgatgacatcaagaggaaaaacaagcctatcatt
ttatctcatcacatgcttcccggtttgcaagaagggcaagataagatgtcaaaaagtgac
ccatcttcttccatctttatggaggatgaagaggcagaagtaaatttgaagataaagaaa
gcattctgtccgccgcagcaggttgagaagaatccttgtctggaatacctcaaatacatt
atcttcccttggtttaatgaattcaaggtggaacggagtgaaaagaatggtggagaaaag
acctatgaaagctttgaaaaacttgttgctgattatgaaagtggtgaattgcatcctggt
gacctgaaacctgctttgtctaaagcgataaatatgatattgaagcctgtacgagatcac
ttcaacaatgatgctaatgctaaggatctcttgaaacgtgttaagggttatagagtaaca
cgataa

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Ontology (5)   
   KEGG BRITE (5)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (34)   

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