KEGG   Ricinus communis (castor bean): 8278050
Entry
8278050           CDS       T01087                                 
Name
(RefSeq) translation initiation factor IF-2, chloroplastic
  KO
K02519  translation initiation factor IF-2
Organism
rcu  Ricinus communis (castor bean)
Brite
KEGG Orthology (KO) [BR:rcu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03012 Translation factors [BR:rcu03012]
    8278050
   03029 Mitochondrial biogenesis [BR:rcu03029]
    8278050
Translation factors [BR:rcu03012]
 Eukaryotic type
  Initiation factors
   MTIFs
    8278050
 Prokaryotic type
   8278050
Mitochondrial biogenesis [BR:rcu03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   Mitochondrial translation factors
    8278050
SSDB
Motif
Pfam: GTP_EFTU IF-2 MMR_HSR1 GTP_EFTU_D2 IF2_N Ras Roc RsgA_GTPase GTP_EFTU_D4 Arf
Other DBs
NCBI-GeneID: 8278050
NCBI-ProteinID: XP_002532827
UniProt: B9T3K8
Position
9:25278427..25288038
AA seq 1033 aa
MGSMVVLVGSMPSLASLISLGSLSVAAATSSSSDSYYSSSYSLVRRVSLSKRGLKSAKRW
HCVCKCSVTTTDFIADQGNAVSIDSNNSFRASSNGGDADSEILLKPAPRPVLKPSLGSKG
DSLLGMSSTQLNSGDSDNDDEQERNKVIESLGEVLEKAEKLETSKPSGPGNPSSSGKDNG
NVNKITPPNIGTNSRIAKSESSGATRKTKTLKSVWRKGDTVSSVQKVVKEAPKVINKLVK
EDTITGEGTKLESQSSFPLRPVQPPLRPQPKLQAKPSVAPPPVMKKPVILKDVGAAPRPP
VSGEADSKNNGRQPILVDKFARKKPVVDPLIAQAVLAPTKPGKGPAPGKFKDRKKSISPG
GPRRRLVNNDELEIPDEETSELNVSIPGTARKGRKWSKASRKAARLQAAKDAAPVKVEIL
EVGENGMLIEELAYNLTISEGEILGYLYSKGIKPDGVQTLDKDMVKMICKEHDVEVIDAD
PVGFEEMARKREILDEDDLDKLEDRPPVLTIMGHVDHGKTTLLDYIRKSKVTASEAGGIT
QGIGAYKVLTPVDGKMQPCVFLDTPGHEAFGAMRARGARVTDIAIIVVAADDGIRPQTNE
AIAHAKAAGVPIVVAINKIDKDGANPERVMQDLSSIGLMPEDWGGDIPMVQISALKGDNI
DDLLETVMLVAELQELKANPHRNAKGTVIEAGLDKSKGPIATFIIQNGTLKRGDVVVCGE
AFGKVRALFDDGGKRVDEAGPSIPVQVIGLSNVPKAGDEFEAVASLDIAREKAEACAELL
RNERITAKAGDGKITLSSLASAVSSGRLSGIDLHQLNIILKVDVQGSVEAVRQALQVLPQ
DNVTLKFLLQATGDVSSSDVDLAIASEAIILGFNVKAPGSVKSNAENKGVEIRLYRVIYD
LIDDVRNAMEGLLEPVEEQETIGSAVVRAVFSSGSGRVAGCMVTDGKVVKGCGVKVIRKR
KTIHVGVLDSLRRVKELVKEVSAGLECGIAMEDYDDWEEGDTIEAFNTVEKKRTLEEASA
SMAAALEHAGINV
NT seq 3102 nt   +upstreamnt  +downstreamnt
atgggttcaatggtagttcttgttgggagcatgccgtctttggcttccttgattagctta
ggaagtttaagtgtggcagcagcgacttctagttcttcagactcatattattcatcctca
tattcacttgttcgaagagtttctttatcgaaaaggggtcttaagagtgccaaaagatgg
cattgcgtttgtaaatgctctgttactaccacagattttattgctgatcaaggcaatgct
gtatccattgattctaataattcatttagagcaagcagtaatggtggagatgctgacagt
gaaatcttgcttaagcctgctcctaggcctgtcttaaaaccttcattagggtctaaaggt
gattcccttttaggtatgagctctactcagttgaattctggagattctgataatgatgat
gaacaagagaggaataaagtaattgagtcgcttggtgaggtgttggagaaggctgaaaag
cttgaaacttctaaaccaagtggaccgggtaatcctagcagtagtgggaaagacaatgga
aatgtaaataaaataacaccacctaacattggtactaattcacgaattgctaaatctgag
agttcaggagccactcgtaaaactaaaactttgaagagcgtgtggcgaaaaggggatact
gtgtcctccgtgcaaaaggttgtaaaggaagctcctaaagttattaataagcttgtgaaa
gaagatactataacaggggaaggtacaaagctagaatctcaatctagttttcctttaaga
cctgtgcagccacccttgagacctcaaccaaagttacaggcaaagccatctgtagctcct
cctcctgtgatgaaaaagcctgttatcttgaaggatgtgggagcagccccaagaccacca
gttagtggtgaagctgattcgaaaaataatggacggcagcctattttagttgataaattt
gcccgcaaaaaaccagttgtagatcctctaattgctcaggcagttttagcccccacaaaa
cctggaaagggcccagcccctggaaaattcaaggaccgaaagaagagtatttcacctgga
ggaccaaggagacgacttgttaataatgatgaacttgagattcctgatgaggagacatca
gaactgaatgtctctattccaggtacagctaggaaagggaggaagtggagtaaagctagc
cggaaggctgccagactccaggctgccaaagatgcagctcctgtcaaagtagaaatttta
gaggttggggaaaatggtatgttaattgaggagttagcctacaacttaaccatcagtgaa
ggtgaaattcttgggtatttgtactcaaaggggattaaacctgatggagtgcagactttg
gataaggacatggtaaagatgatatgcaaggaacatgatgtggaagttatagatgctgat
ccagttggatttgaagaaatggcaaggaaaagagaaattcttgatgaagatgatcttgac
aaactagaggacaggcctccagttctaactataatggggcatgtggatcatggcaagaca
actctactggattacattcgtaaaagcaaggtgactgcctcagaagctggtggaattaca
caaggaattggagcatataaagtcctcacacctgtggatggaaaaatgcaaccttgtgtt
tttcttgatactcctggacatgaggcatttggtgcaatgagagctcgtggggcaagggtg
acagatattgctattattgtggtggcagctgatgatgggatccgtcctcaaacaaatgag
gccatagctcatgcaaaagcagctggagttccaattgttgttgctataaacaagatagat
aaagatggggctaatccagaaagagtcatgcaagatctttcttcaattggtcttatgcct
gaagactggggcggtgacatcccaatggttcagattagtgctctcaagggggataacata
gatgatttgctagaaactgttatgcttgttgctgagttacaagagttgaaggctaatccg
catagaaatgcaaagggtacagttattgaggcaggtcttgataaatccaaaggtccaata
gctacatttattatacagaatggcacacttaaaagaggggatgttgtggtttgcggagaa
gcctttggaaaggttcgggctttatttgatgatggtggaaaacgagtggatgaagctgga
ccatctattcctgtacaggttattggattgagtaacgtaccaaaagctggcgatgaattt
gaggctgttgcctctcttgatattgcacgtgaaaaggcggaagcatgtgctgaattattg
cgaaatgagcgaataacagccaaggctggagatggcaagattacactatcttccttagca
tcagctgtttcatcaggaaggctgtctggaatagacttgcaccaactgaatattatatta
aaagttgatgttcagggatctgttgaagctgtccgacaagccttacaggtgctccctcaa
gataatgtcaccttgaagttcctcttacaagcaacaggggatgtaagctcaagtgatgtt
gatcttgccattgccagtgaagctattattttaggatttaatgtcaaagcaccgggttct
gtcaagagcaatgcagaaaacaaaggtgttgagattcggctatatagagttatatatgat
cttattgatgatgtacgaaatgcaatggaaggacttctagagcctgttgaggaacaagaa
acaattgggtcagcagtagttcgggctgtatttagcagtggaagcggccgtgttgctgga
tgcatggtaacagatgggaaagtagtgaaaggctgtggtgttaaggttattcgaaagcga
aagacaatccatgttggcgttctcgattccttgagacgagtaaaggaacttgtaaaagag
gtaagtgctgggctagagtgtggtattgcaatggaagattatgatgattgggaggaagga
gatactattgaagccttcaacacagtcgagaagaagcggacccttgaagaggcatcggct
tcgatggcagctgcactggaacatgcaggtattaatgtgtag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (25)   
   KEGG ORTHOLOGY (1)   
   RefGene (21)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (10)   
   Pfam (10)   
All databases (42)   

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