KEGG   Ricinus communis (castor bean): 8278277
Entry
8278277           CDS       T01087                                 
Name
(RefSeq) elongation factor Tu, chloroplastic
  KO
K02358  elongation factor Tu
Organism
rcu  Ricinus communis (castor bean)
Pathway
rcu04626  Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:rcu00001]
 09150 Organismal Systems
  09159 Environmental adaptation
   04626 Plant-pathogen interaction
    8278277
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03012 Translation factors [BR:rcu03012]
    8278277
   03029 Mitochondrial biogenesis [BR:rcu03029]
    8278277
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rcu04147]
    8278277
Translation factors [BR:rcu03012]
 Eukaryotic type
  Elongation factors
   8278277
 Prokaryotic type
   8278277
Mitochondrial biogenesis [BR:rcu03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   Mitochondrial translation factors
    8278277
Exosome [BR:rcu04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   8278277
  Exosomal proteins of breast cancer cells
   8278277
  Exosomal proteins of colorectal cancer cells
   8278277
SSDB
Motif
Pfam: GTP_EFTU GTP_EFTU_D3 GTP_EFTU_D2 MMR_HSR1 cobW DAP_epimerase RsgA_GTPase
Other DBs
NCBI-GeneID: 8278277
NCBI-ProteinID: XP_048229290
Position
4:complement(27224977..27226981)
AA seq 484 aa
MAISASATVSTSSKLAYPHPSPSSTSSTFSFKPTNNLTPKTLLFSSFISPFLTTTCSTST
SSPTSTIRRRSFTVRAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMALAAMGNSAPK
KYDEIDAAPEERARGITINTATVEYETENRHYAHVDCPGHADYVKNMITGAAQMDGAILV
VSGADGPMPQTKEHILLAKQVGVPNMVVFLNKQDQVDDEELLQLVELEVRELLSSYEFPG
DDIPIISGSALLALEALMANPSISRGENQWVDKIYELMDSVDSYIPIPQRQTDLPFLLAV
EDVFSITGRGTVATGRVERGTIKVGETVDIVGLRETRNTTVTGVEMFQKILDEAMAGDNV
GLLLRGVQKVDIQRGMVLSKPGTITPHTKFSAIVYVLKKEEGGRHSPFFAGYRPQFYMRT
TDVTGKVTAIMNDKDEESKMVMPGDRVKMVVELIVPVACEQGMRFAIREGGKTVGAGVIQ
SIIE
NT seq 1455 nt   +upstreamnt  +downstreamnt
atggcaatttcagcctcagctacagtctccacctcctccaaactagcatacccacatcct
tctccttcctccacaagctccactttctcttttaaacccaccaataacctaaccccaaaa
accctccttttctcttctttcatttccccttttctcaccaccacctgctccacctccacc
tcctcccccacctctaccatccgccgtcgctccttcactgtccgtgctgccaggggcaaa
ttcgagagaaaaaaaccccatgtcaacataggcacaattggccacgtagaccatggcaaa
accacattaaccgccgccttaaccatggccttagccgctatgggtaacagcgctcccaaa
aaatacgatgaaattgacgcagcccccgaagaacgagctcgtggtattactatcaacact
gccacagtcgaatatgaaaccgaaaatcgccattatgcgcacgtggactgccctggtcac
gctgattatgttaaaaacatgattactggagctgcccagatggacggagctattcttgtg
gtttctggtgctgatggtcccatgccccaaactaaagaacatatcttgttagctaaacaa
gttggtgttcctaatatggttgttttcttgaataaacaggaccaagttgatgacgaggaa
cttttacagttggttgaattagaggttcgtgagttattgtcttcttatgaatttcctggt
gatgatattcctattatttctggctctgctcttttggctttagaggctttaatggccaat
cctagtattagtagaggagagaaccaatgggtagataagatttatgagcttatggattcc
gttgatagttatattcctattcctcaaaggcagactgatttgcctttcttacttgccgtt
gaagatgtcttttctattactggtcgtggtactgttgccactgggagagttgaaagaggg
acaattaaggttggtgagactgttgatattgttggtcttagagaaactaggaatactact
gttactggtgttgaaatgtttcaaaaaatcttagatgaagctatggctggtgataatgtt
ggtttgttgttaagaggtgttcaaaaggttgatattcagcgaggtatggttttgtctaag
cctggaactattacccctcacactaagttttccgctattgtttatgtgttgaagaaagaa
gagggtggtaggcattcaccctttttcgccggttatagacctcagttttacatgaggact
actgatgttactggaaaggtgactgctattatgaacgacaaggatgaggagtccaaaatg
gttatgcctggtgatcgtgtgaagatggttgtggagcttatcgtgcctgttgcttgtgaa
caaggtatgaggtttgccatcagagaaggagggaagactgttggagctggtgtcatccag
tccatcattgagtag

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (25)   

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