KEGG   Ricinus communis (castor bean): 8279660
Entry
8279660           CDS       T01087                                 
Name
(RefSeq) heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic
  KO
K13789  geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
Organism
rcu  Ricinus communis (castor bean)
Pathway
rcu00900  Terpenoid backbone biosynthesis
rcu01100  Metabolic pathways
rcu01110  Biosynthesis of secondary metabolites
Module
rcu_M00366  C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:rcu00001]
 09100 Metabolism
  09109 Metabolism of terpenoids and polyketides
   00900 Terpenoid backbone biosynthesis
    8279660
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01006 Prenyltransferases [BR:rcu01006]
    8279660
Enzymes [BR:rcu01000]
 2. Transferases
  2.5  Transferring alkyl or aryl groups, other than methyl groups
   2.5.1  Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
    2.5.1.1  dimethylallyltranstransferase
     8279660
    2.5.1.10  (2E,6E)-farnesyl diphosphate synthase
     8279660
    2.5.1.29  geranylgeranyl diphosphate synthase
     8279660
Prenyltransferases [BR:rcu01006]
 Terpene biosynthesis
  Prenyl diphosphate synthase
   8279660
SSDB
Motif
Pfam: polyprenyl_synt
Other DBs
NCBI-GeneID: 8279660
NCBI-ProteinID: XP_002529802
UniProt: B9SUY3
Position
8:3026005..3028315
AA seq 345 aa
MIFFSSVSSSPAPALYLPRKTPNVHHLSKLGIRIQCCSPTVSVSSQSKSTQFDLKTYWTT
LIAEINQKLDQAIPVQFPEQIYEAMRYSALAKGAKRAPPVMCVAACELFGGNRLAAFPTA
CALEMVHTASLIHDDLPCMDDDPSRRGQPSNHTIYGVDMAILAGDALFPLGYRHIVSHTP
TGLVPEPRLLRVIAEIARAVGSTGMAAGQFLDLEGGPSFVEFAQEKKYGEMSECSAVCGG
LLAGAEDDEIQRLRRYGRAVGVLYQVIDDVLEAKAMNKENEEKRRNGKSYVSLYGIEKAM
EVAEELRTQAKKELDGFAKYGDSVMPLYSFVDYAADRGFTIGELS
NT seq 1038 nt   +upstreamnt  +downstreamnt
atgattttcttttcatctgtatcatcatcaccagctcctgctctctacctcccaagaaaa
acccccaatgttcatcacctctcaaagcttggaatccgaattcaatgttgttcaccgact
gtgtcagtttcaagccaatcaaaatcgacccagttcgatttaaagacttactggaccacc
cttatagcagagatcaatcagaagctagaccaagctattccagttcagttcccagaacag
atctatgaggccatgaggtattcagctcttgctaagggtgctaaacgggccccacctgtc
atgtgtgttgccgcttgtgagctctttggtggcaaccgcctcgctgccttccctactgct
tgtgctcttgaaatggtgcatacagcttcgttgattcatgatgatcttccttgtatggat
gatgacccttcacgccgaggccagccctcaaaccacacaatctatggtgttgatatggca
atccttgctggggatgcactttttcctcttggctaccgccacattgtctcccacacgccc
acaggtcttgttccggagccacgcctacttcgtgtgattgctgagattgctcgtgctgtg
ggatctacaggaatggctgcagggcagttccttgaccttgagggtggccccagtttcgtg
gagtttgctcaagagaaaaaatatggtgaaatgagcgagtgctctgcagtttgtggagga
ctactggctggtgctgaggatgatgaaatacaaagattaaggaggtacggaagagctgtt
ggagtattgtatcaagtgattgatgatgtactggaagcaaaagcaatgaataaagaaaat
gaggagaagagaaggaacgggaagagttatgttagcctatatgggattgagaaggcaatg
gaggttgcagaagagctgagaacacaggcaaagaaggaattggatgggtttgcgaagtac
ggtgatagtgtcatgccactatatagctttgtggattatgctgcagatagaggtttcact
attggagagttgagttaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (6)   
   KEGG ENZYME (3)   
   KEGG REACTION (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (32)   

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