KEGG   Ricinus communis (castor bean): 8280336
Entry
8280336           CDS       T01087                                 
Name
(RefSeq) rhamnogalacturonate lyase B
  KO
K18195  rhamnogalacturonan endolyase [EC:4.2.2.23]
Organism
rcu  Ricinus communis (castor bean)
Brite
KEGG Orthology (KO) [BR:rcu00001]
 09190 Not Included in Pathway or Brite
  09191 Unclassified: metabolism
   99980 Enzymes with EC numbers
    8280336
Enzymes [BR:rcu01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.2  Acting on polysaccharides
    4.2.2.23  rhamnogalacturonan endolyase
     8280336
SSDB
Motif
Pfam: Rhamnogal_lyase CBM-like fn3_3 CarboxypepD_reg
Other DBs
NCBI-GeneID: 8280336
NCBI-ProteinID: XP_002527353
UniProt: B9SMY4
Position
2:4833624..4837961
AA seq 642 aa
MPLQGVQLNIQDNHVMLDNGILQVTLSNPEGIVTGIQYNGIGNLLEVLNDESNRGYWDLV
WSTPGSTGTTGIFDVIKGTSFKVIVETEEQVELSFTRSWDPSLEGKLIPLNIDKRFVMLR
GSSGFYSYAIFEHLKEWPGFNLAEARIAFKLRKEKFHYMAVADNRQRYMPLPDDRLPPRG
QALAYPEAVLLVNPVESEFKGELDDKYQYSCENKDIRVHGWICMDPSVGFWQITPSNEFR
SGGPVKQNLTSHVGPTTLSVFLSAHYSGEDLVPKFVAGEAWKKVFGPVFMYLNSVLVGDD
PLSLWEDAKEQTEIEVQSWPYFFPASEDYPKSEQRGSVSGRLLVKDRFVSDDYISANGAY
VGLAPQGDVGSWQRECKDYQFWSKADENGYFSINSIRTGDYNLYAWVPGFIGDYRCDVAI
TITSGCDINMHDLVYEPPRDGPTLWEIGIPDRSAAEFYIPDPNPMYINKLYVNHPDRFRQ
YGLWDRYAELYPDGDLVYTVGVSDYRKDWFFAQVNRKKDDNTYQRTTWQIKFKLDNVDKN
GIYKLRVAIASATVAELQVRINDPKANIIFSSGMIGKDNSIARHGIHGLYWLYNVDVPGV
RLVQGGNTVFLTQPRSSSPFQGIMYDYIRLEEPPASAPNKII
NT seq 1929 nt   +upstreamnt  +downstreamnt
atgccactacaaggggtgcaactcaatattcaagataatcatgtgatgttggataatgga
atcctgcaagttacactttcaaatccagaaggaattgtcactggcatacagtataatggc
attggcaacttgcttgaagttcttaatgatgaatctaacagagggtattgggacctggtt
tggagcacaccaggaagcacaggaacaactggaatttttgatgtgatcaaaggaacaagc
tttaaggttatagtggaaactgaagaacaagtggagctctcattcacacgatcatgggat
ccctccttagagggcaagctcattccattaaacatagacaaaaggttcgtgatgcttcgt
ggctcctcaggattctactcatatgcaatctttgagcatttgaaagaatggcctggtttc
aacctggcagaggccagaattgcattcaagcttagaaaagaaaagtttcactacatggca
gtggctgacaatcggcaaagatatatgcccttacctgatgaccgtttgccgccaagaggc
caagccctggcctatcccgaggctgtcttgcttgtcaatcctgtcgagtctgagttcaaa
ggagagttggatgacaagtaccaatattcatgtgagaacaaagacatcagggtacatggt
tggatttgcatggacccatctgtggggttttggcaaatcacacctagcaacgagtttcga
tctggtggacccgtcaaacagaacttgacatctcatgttggccccaccaccctttctgtg
tttctcagtgctcattatagtggggaagatttagtgccaaaatttgtcgctggagaggct
tggaagaaagtatttggtcctgtttttatgtatttgaattctgtcctggttggagatgat
cctctttcactttgggaggatgccaaagaacagacggagattgaagtccaaagctggccc
tatttttttccagcttcggaagattatccaaagtcagaacagagggggagtgtgagcggc
agactacttgtcaaagacaggtttgttagtgatgattatatatcagcaaatggagcttat
gttggattggccccacaaggagatgttggatcatggcaaagggaatgcaaggactatcaa
ttctggagtaaagcagatgagaatggttatttctcaattaacagtatacgtacgggtgat
tataatctttatgcatgggttcctggttttatcggtgattaccggtgcgatgttgccatt
accattacctcaggttgtgatattaatatgcatgatcttgtgtatgagcctccaagagat
ggcccaacattatgggaaataggaattcctgatcgttccgctgcagagttttatattcct
gatccaaatcctatgtacatcaacaaactctatgttaatcatcctgacaggtttaggcaa
tatggactgtgggatagatatgctgaactatatcctgatggagacttagtatatacagtt
ggtgtcagtgactatagaaaagattggttcttcgctcaggttaacaggaaaaaagatgat
aatacgtaccagagaactacatggcaaatcaagttcaaactagacaatgttgataaaaat
ggcatttataaactgcgtgtggcaattgcatcagcaactgttgctgaattgcaggttcga
attaacgatccaaaagcgaatattatattttcgagcggaatgatagggaaggataactca
atcgcaagacatggaatccatggactttactggttgtacaacgtagatgtaccaggcgtt
cgacttgttcaaggaggtaacacagtctttttgacacaaccaagaagcagcagccccttt
caagggattatgtatgactatattcgtttagaagaacctcctgcttctgctccaaataag
ataatataa

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Ontology (2)   
   KEGG BRITE (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (19)   

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