KEGG   Ricinus communis (castor bean): 8280540
Entry
8280540           CDS       T01087                                 
Name
(RefSeq) cyclic nucleotide-gated ion channel 18 isoform X1
  KO
K05391  cyclic nucleotide gated channel, plant
Organism
rcu  Ricinus communis (castor bean)
Pathway
rcu04626  Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:rcu00001]
 09150 Organismal Systems
  09159 Environmental adaptation
   04626 Plant-pathogen interaction
    8280540
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:rcu04040]
    8280540
Ion channels [BR:rcu04040]
 Voltage-gated cation channels
  Cyclic nucleotide-gated channel (CNG)
   8280540
SSDB
Motif
Pfam: Ion_trans cNMP_binding IQ
Other DBs
NCBI-GeneID: 8280540
NCBI-ProteinID: XP_048229676
Position
5:30176400..30180955
AA seq 744 aa
MNRFIPNPNSKLRHFRRLHHHLTSPSLASSATSLSDANPLHILWHYQILDPDSDIVTYWN
YVFLITSIVALFVDPLFFFLPYADADGVCLTNDASLAVLITYFRSFADLFFLLHIIMKFR
TAFVAPNSRVFGRGELVMDAKEIARRYLRSDFVIDLAAALPLPQVVIWVVIPAARNGRAD
HANNTLSLIVLIQYIPRLFVIFPLHQRIVKSTGFIAKTAWAGAAYNLLLYMLASHVRIRS
PLFFPFSSSSLLSFFYWGIHGYTCKLLLQTLGSSWYLLSLGRQFYCWKSECLKENKAGVI
GCIESFLDCNSLGQFERQYWRNVTHVRTNCDPYNNNITFEFGIFAGAFTNDVATAPFVQK
YLYCLWWGLRNLSSYAQTLETSTFLGENIFCIVTCIIGLVLSAQLIGNMQTNLQSMTVRV
EEWRIKRRDTEEWMRHRQLPPDLQERVRRFVQYKWLATRGVHEESILRSLPLDLRREIQR
HLCLALVRRVPFFSQMDDQLLDAICERLVSSLSTEGTYIFSEGDPVNEMLFIIRGTLESS
TTNGGRSGFFNSITLRPGDFCGEELLTWALMPNSSAHLPASTRTVKALSEVEAFALQAED
LIFVAQQFKRLQSKKLQHAFRYYSHQWRTWGAILIQSVWRRYQKRKMARELASRERLSYI
QIPEDGYYSSNELAEGDYEDEHGESLSMENANNAQHLGATILASKFAANTRRGINQRLVD
SASSSVKVPKLFKPVEPDFFADHV
NT seq 2235 nt   +upstreamnt  +downstreamnt
atgaatagattcattcctaatccaaactccaagctccgccattttaggcgtctccaccac
cacctgacgtctccctctctcgcgtcttcagccacttccttatcagacgctaaccctctc
catattctatggcattaccaaatcctcgacccggacagcgatattgtcacttactggaac
tacgttttccttatcacatctatcgtcgctcttttcgtcgacccgctctttttctttctc
ccttatgcagatgccgacggcgtctgcttgacaaatgatgcaagccttgctgttctaatt
acttattttaggtccttcgctgacttgttctttttgctgcatatcatcatgaagttccgt
acagcttttgttgctccaaattctagagtgttcggtcgtggtgaacttgtcatggatgct
aaagaaatcgctagacgttatcttaggtctgattttgttattgatcttgccgctgcactt
cctcttcctcaggttgtgatttgggtggtaattccagcggcaagaaatggaagagctgat
catgcaaacaatacactttctcttatagtacttattcaatatattcctagactctttgtt
atctttccattgcaccaacgaattgtaaaaagtacaggttttattgccaaaactgcttgg
gcaggagctgcatataatctccttctatacatgcttgctagtcatgtaagaatcaggtca
ccccttttctttcctttttcttcttcaagcttactctcttttttctattggggaatacat
ggttacacatgtaaacttttgttacagacattagggtcttcatggtacctattgtcattg
gggcgacaattttactgctggaaatccgagtgtttaaaggagaacaaggctggagttata
ggttgcattgaaagttttttagattgtaacagtttgggacagtttgaacgtcagtattgg
cggaatgttactcatgttcgtactaattgtgatccatataacaacaatatcacatttgag
tttggaatatttgctggtgcttttacaaatgatgttgctacagcaccttttgtacagaag
tacttgtattgtctctggtggggattaagaaatttaagctcatacgcacagactctggag
acaagcacatttctgggtgagaatatcttctgcatcgtcacttgcattattggtttggtt
ctttccgcacagctgattggtaacatgcagactaatttgcaatctatgacggtaagagtt
gaagagtggaggatcaagcgaagagatacagaggagtggatgaggcatcgccaattacct
cctgacttgcaggagcgcgttcgccgatttgttcagtacaagtggcttgctacaagagga
gttcacgaagaatctatattgcgctcactgccattggaccttagacgagaaatccagcga
catttatgtctggcccttgttcgccgtgtcccattcttctcacaaatggatgaccagcta
ctggatgctatatgcgagcgcctcgtttcctctttgagcactgagggcacctatatattt
tcagagggtgatcctgtaaatgagatgttgtttataattagaggaacattagagagctca
acgactaacggaggaaggtctggattcttcaactccatcacccttagacctggtgacttc
tgcggtgaggaattactgacgtgggcattaatgcccaattctagtgcgcacctgcctgct
tcaactagaactgtcaaagctctctctgaagttgaggctttcgcccttcaagctgaagac
ctcatatttgtcgcacagcaatttaagagacttcaaagcaagaagctgcaacatgccttt
aggtactattctcaccaatggagaacatggggtgctattttgatacaatcagtttggaga
agatatcagaaaagaaagatggcaagggagctggcttcaagagagagactttcttacatt
caaatacctgaggatggatattattctagcaatgagctagcagaaggagattacgaggat
gaacatggtgagagtttatcaatggaaaacgcaaacaatgcacagcatcttggagcaaca
atcttggcttcaaaatttgctgcaaatactagaagagggattaatcagagacttgttgat
tctgcttcatccagcgtaaaggtgcccaagttgtttaaacctgttgagcctgatttcttc
gcagaccatgtttag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (3)   
   Pfam (3)   
All databases (26)   

Download RDF
DBGET integrated database retrieval system