KEGG   Ricinus communis (castor bean): 8285010
Entry
8285010           CDS       T01087                                 
Name
(RefSeq) long chain base biosynthesis protein 1 isoform X1
  KO
K00654  serine palmitoyltransferase [EC:2.3.1.50]
Organism
rcu  Ricinus communis (castor bean)
Pathway
rcu00600  Sphingolipid metabolism
rcu01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:rcu00001]
 09100 Metabolism
  09103 Lipid metabolism
   00600 Sphingolipid metabolism
    8285010
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:rcu01007]
    8285010
Enzymes [BR:rcu01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.1  Transferring groups other than aminoacyl groups
    2.3.1.50  serine C-palmitoyltransferase
     8285010
Amino acid related enzymes [BR:rcu01007]
 Aminotransferase (transaminase)
  Class II
   8285010
SSDB
Motif
Pfam: Aminotran_1_2 OKR_DC_1 Cys_Met_Meta_PP Aminotran_5 CBM32
Other DBs
NCBI-GeneID: 8285010
NCBI-ProteinID: XP_002518026
UniProt: B9RWA7
Position
7:482503..490125
AA seq 482 aa
MGSVFLSQFVNTTIDWVKVALDAPSARAVVFGVHIGGHLFVEGLLLVVILFLLSQKSYKP
PKRPLTNKEIDELCEDWVPEPLIPPITQEMQYEPAVLESAAGPHAIINSKEVVNFASANY
LGLIGHDKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTPDSILYSYGL
STMFSAIPCFCKKGDIIVVDEGVHWGIQNGLYLSRSTIVYFKHNDMESLQNTLEKITAEK
KRAKQLRRYIVVEAVYQNSGQIAPLNEIIKLKEKYRFRVLLDESNSFGVLGRFGRGLTEY
YGVPVEKIDIITAAMGHALATEGGFCTGSARVIDHQRLSSSGYVFSASLPPYLASAAITA
IDVLEDNPALITKLKENIAVLWKGLCNIQGLSIASNPESPIVFLRLENTTGSVKGDLKLL
EDIADRALKEDSVFVVVSKRSTLDKCRLPVAIKLYVSAAHSEADLIKACESLKRVSALVL
RN
NT seq 1449 nt   +upstreamnt  +downstreamnt
atgggatcggttttcctttcacagtttgtgaatactactattgattgggtgaaggtagct
ttggatgctccctctgcccgagctgttgtttttggagttcatattggaggacatcttttc
gtcgagggtcttcttctagtggtcattctttttcttctttcccagaagagttacaagccc
cctaaacgccctttaactaacaaggaaattgatgagctatgtgaagactgggttccagaa
cccctcatccctcctattacacaagagatgcaatatgaaccagcagttttggaaagtgct
gcagggccacatgcaataattaatagcaaagaagttgtgaactttgcttcagctaactat
cttggactaatagggcatgacaaattacttgagtcatgcacctctgcattggaaaaatat
ggtgttggttcatgtggtccgcgtggattctatgggacaatcgatgtccaccttgattgt
gaggcaagaatagcaaagtttttgggaactcctgattcaattctatattcatatggactt
tctaccatgttcagtgcaattccatgtttttgcaagaaaggagatattatagtagttgat
gagggagtccattggggaatacaaaatggcctttatctttctagaagcaccattgtgtat
tttaagcataatgacatggaatctctacaaaatactttggagaaaataactgcagagaaa
aagcgtgctaagcagttgcggcgttacattgtagttgaagcagtgtaccagaattctggc
caaatagcaccactgaatgagatcatcaagttgaaggagaaatatcgcttccgtgttttg
ttggacgagagcaactcatttggtgtgcttgggaggtttggaagaggtctaactgaatat
tatggggttccggttgagaagatagatattataactgcagctatggggcatgcactagcc
actgaaggaggattctgcactggaagtgccagagtcattgatcaccaacgattgagcagc
tctgggtatgtgttttctgcttctttacctccatatctggcaagtgctgcaattactgct
attgacgtcctagaggataatcctgctctaataaccaagctgaaagaaaacattgctgta
ttgtggaaagggttgtgcaacatacagggcctttctatagcaagcaatccagaatcacct
attgtttttctcaggctggagaataccacaggttctgtaaaaggtgacctaaaactcctt
gaagatattgcagatcgtgcgttgaaggaagactctgtatttgtggtagtttcgaaaaga
tcaacactggataaatgccgtttgcctgtggcaattaaattgtatgtttcggctgcccat
agtgaagctgatttgattaaggcatgtgaatccttgaagagagtttcagcattggtgctg
aggaattga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (4)   
   KEGG PATHWAY (2)   
   KEGG MODULE (2)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (5)   
   Pfam (5)   
All databases (38)   

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