KEGG   Ricinus communis (castor bean): 8288456
Entry
8288456           CDS       T01087                                 
Name
(RefSeq) protein HASTY 1
  KO
K14289  exportin-5
Organism
rcu  Ricinus communis (castor bean)
Pathway
rcu03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:rcu00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    8288456
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:rcu03016]
    8288456
   03036 Chromosome and associated proteins [BR:rcu03036]
    8288456
Transfer RNA biogenesis [BR:rcu03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    8288456
Chromosome and associated proteins [BR:rcu03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Other miRNA pathway proteins
     8288456
SSDB
Motif
Pfam: Exportin-5 Xpo1
Other DBs
NCBI-GeneID: 8288456
NCBI-ProteinID: XP_048226148
Position
10:11663246..11675257
AA seq 1208 aa
MEDSNSNNITNNVARAIVAALDWNSTPDARKAAVSFLESIKTGDVRILANTSFLLVKKDW
SSEIRLHAFKMLQHLVRLRWDELSPMERRNFANVAVELMSEIANSCEEWALKSQTAALVA
EIIRREGVELWQELLPSLVSLSGQGPVQAELVSMMLRWLPEDITVHNEDLEGDRRRLLLR
GLTQSLPEILPLLYTLLERHFGAALHDVGKQQLDAAKQHAATVTATLNAVNAYAEWAPLP
DLAKYGVIHGCAFLLSSADFRLHACEFFRLVSPRKRPVDASASEFDSAMSNIFQILMNVS
REFLYKSGSSAGVVDETEFEFAEYICESMVSLGSSNLQCISGDSNMLSHYLQQMLGFFQH
YKLALHYQSLVFWLALMRDLMSKPKVVAQPSGDVSAVNNMGPGSGQVDNEKTKILSLITD
DICSTIMDINFQRMLKREKVFPGSSLYLGTLELWSDDFEGKGDFSQYRSKLSELMKFIAI
FKPLIASAKISERIFSIIKSLLVSPMPVQELAVMESTQVALENVVNAIFDGSSEFAGGSP
EVHLALCRIFEGLLQQLLSLKWSEPALVEVLGHYLEALGSFLKYFPDAVGSVINKLFELL
TSLPVVVKDPSTSSARHARLQICTSFIRIAKTSDKSILPHMKGVADTMAYMQREGCLHRS
EHNLLGEAFLIMASAAGTQQQQEVLAWLLEPLSQQWVQIDWQNNYLSEPLGLVRLCSETP
FMWSIFHTVTFFEKALKRSGTRKGNTTLQNSSTSTLLHPMASHLSWMLPPLLKLLRAIHS
LWSPAIYQALPGELKAAMTMSDVERYALLGEGNTKLPKGALTFIDGSQIDMSKEGYTEIN
EADIRNWLKGIRDSGYNVLGLSMTIGDPFFKCLDIHSVSVALMENIQSMEFRHIKQLVHS
VLMYLVKSCPSEMWKVWLEKLLYPLFLHVQQVLIFSWSSLLHEGKARVPDVLGMLAGSDL
KVEVMEEKLLRDLTRETCSLLSAIASPGVNTGLPSLEQSGHVNRIDISSLKDLDAFALNC
MVGFLLKHKGLALPALQICLEAFTWTDSEAVTKVSSFCATVIVLAISTNSVELREFVSKD
LFYAIIKGLELESNAVISADLVGLCREIYIYLRDRDPAPRQVLLSLPCITTQDLVAFEEA
LTKTSSPKEQKQHLKSLLLLATGNKLKALAAQKSVNIITNVTTRPRSSVNAAETRIDEGE
SVGLAAIL
NT seq 3627 nt   +upstreamnt  +downstreamnt
atggaggattcaaatagcaataacataacaaacaatgtggcaagagccattgttgctgct
cttgactggaactctactcctgatgctcgcaaagccgccgtttcttttcttgaatccata
aaaacaggagatgtacgcattctggcaaatacatcgttccttcttgtaaaaaaggattgg
tcttctgaaatccggttgcatgctttcaagatgctgcagcatttggttaggttgcgatgg
gacgaattaagcccaatggaacgcaggaattttgcaaatgttgctgttgaattgatgtct
gagattgcaaattcttgtgaagaatgggctcttaaaagtcagacagctgcccttgttgct
gagattattagaagagaaggtgttgaactttggcaagagcttcttccatctctggtttcc
ctatccggccagggtcctgttcaagctgagttggtttcaatgatgctgagatggcttcct
gaagatattacagttcacaatgaagatttagaaggtgatcggcgcaggcttttgttacgg
gggcttacccaatccttgcctgaaatcttacctttattatacactttactagaaagacac
tttggagctgctttgcatgatgttgggaagcaacaactggatgctgcaaaacagcatgct
gccacagtaacagctactctgaatgctgttaatgcatatgcagagtgggctcctttgcct
gatctagctaaatatggagtaattcatgggtgtgcttttttactttcttctgctgacttc
cgtcttcatgcttgtgagtttttccgacttgtctccccaaggaagagacctgtcgatgcc
tctgcttctgaatttgattctgcaatgagtaatatctttcagattttgatgaatgtctcc
agagaatttttatacaaatctgggtcgagtgctggggttgtagatgagactgaatttgag
tttgcagaatatatctgtgagagtatggtatctttggggtcttccaacttgcaatgtatt
tctggtgatagcaatatgctctctcattatttgcaacagatgctggggttttttcaacat
tataagctagctcttcattatcaatctctggtcttttggctggcgctaatgcgagatctg
atgtccaagccaaaagttgttgcgcagccatctggagatgtttctgctgttaacaacatg
ggccctggttctgggcaggttgataatgaaaagacaaagattctaagtctaataactgat
gacatttgcagcacaattatggatatcaatttccagcgcatgcttaaaagagaaaaggtg
tttcctggatcatctctttatcttgggacattagagttatggagtgatgattttgaagga
aaaggcgatttcagccagtatcgttcgaagctgtctgaattgatgaagtttattgctatt
tttaagccgctaatagccagtgctaaaatttctgagagaatattttcaatcatcaagagc
ctcttggtttcgccaatgcctgttcaggaattagctgtgatggaatccacacaagtggct
ctggaaaatgttgtaaacgcaatttttgatggatcaagtgaatttgcagggggtagtcca
gaagttcaccttgctttgtgtagaatatttgaaggtttacttcagcaacttctttcattg
aaatggtcggaaccagctcttgtggaagttcttgggcactatttagaagcattgggttcc
ttcttgaaatattttccggatgctgtgggcagtgttatcaataaactatttgagcttctg
acttcacttccagttgttgttaaggatccatcaacaagtagtgcacggcatgcaagacta
cagatctgtacctcattcattcgaatagccaaaacttctgacaaaagcattctgcctcac
atgaagggtgtagcagatactatggcatacatgcaaagagaaggttgcctacatcgtagt
gaacataatcttctaggtgaagcatttcttattatggcttctgctgctgggactcaacaa
cagcaagaagttttggcctggttacttgaacctttgagccagcagtgggtgcagattgac
tggcaaaataactatttatctgaaccacttggtttagttcgcttgtgctctgagacacca
tttatgtggtcaattttccacactgtgacattctttgagaaggcacttaaaaggagtgga
actaggaaaggaaatacaactttacagaacagctcaacaagtactcttttgcatcctatg
gcttcacatctatcctggatgctgcctcctttgttaaaattgctacgtgccatacattcg
ctttggtctccagccatatatcaggcattacctggagaactaaaagctgccatgacaatg
agtgatgttgagcgttatgctcttcttggtgaaggaaacaccaaattgccaaagggtgct
ttaactttcatagatgggtctcagattgacatgagtaaggaagggtacacagaaattaat
gaagctgatatacggaattggttaaaaggcatcagagacagtgggtacaatgtcttgggc
ctatcgatgaccattggtgatccattttttaaatgcttggatattcattctgttagtgta
gcactgatggagaatatacagtcaatggagttcaggcatatcaagcagcttgttcattca
gttttgatgtatttggtcaaatcttgtccttcggaaatgtggaaagtttggttggaaaaa
ctcctgtatccattatttctccacgtgcagcaggttctcatcttttcttggtctagtctt
ttgcatgaaggtaaagcaagggtgccagatgtccttggaatgcttgctgggtcagacctg
aaagtggaagtaatggaggagaaactgctacgagatctaacgcgcgagacatgctcactt
ctttctgctatagcttcaccaggtgtaaatactggacttccttctttggaacaatctggg
catgtcaaccgcattgatatatcttctctaaaggacttggatgcttttgcattaaactgt
atggttggtttcctgttgaagcacaaaggtctggcccttccagcattgcagatttgttta
gaagctttcacttggacagatagtgaagcagtgacaaaagtttcttccttttgtgctaca
gttattgttctagctatatcaacaaatagtgttgaactccgagaatttgtttcaaaagat
ctattctatgcaattatcaaaggcttggagcttgagtcaaatgcagtcatcagcgcagat
ctggttggtctctgtcgagaaatatatatttatcttcgtgatagagatccagcgccaaga
caggttctactctctctcccttgtataacaacccaagatttggttgctttcgaagaagct
ttgacaaagacatctagtcccaaggagcaaaagcagcatctgaagagcttgcttctatta
gctactggaaacaagttgaaggcacttgctgctcagaaaagtgtaaatatcatcacaaat
gttacaacaagacctcgaagctcagtcaatgctgcagaaaccagaattgacgagggggaa
tctgtgggattggcggccattttgtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (20)   
   KEGG ORTHOLOGY (1)   
   RefGene (16)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (29)   

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