KEGG T01087: RCOM

Ricinus communis (castor bean): RCOM_0936010

Entry

RCOM_0936010 CDS T01087

Definition

tfiih, polypeptide, putative

Orthology

K03144

transcription initiation factor TFIIH subunit 4

Organism

rcu Ricinus communis (castor bean)

Pathway

rcu03022	Basal transcription factors
rcu03420	Nucleotide excision repair

Class

Genetic Information Processing; Transcription; Basal transcription factors [PATH:rcu03022]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:rcu03420]

SSDB

Motif

Pfam:

Tfb2 Helicase_C_3 MetRS-N

Other DBs

NCBI-GI:

255556021

NCBI-GeneID:

8275581

UniProt:

B9RZ76

AA seq 451 aa
MPQVRIIAKNFMDMVASLPAMKLDKLYTNPFICQAILRSLPPLAKKYVVQILYIDGPVAD
KTLEEWLLPDGSSKHRVAIDRLTQLRIFTEIVDRKKEISYKLNPTFQTNLQKHLIDGGVL
PGEPLASNIAVRLPTLEELDTYALGQWECFLLHLINSGHAERSTNFSSSMMKIFQRGLLT
QRDKEAPRLTESGFQFLLMDTNAQLWYIIREYISNSEERGLDSADLISFLLELSFHITGE
AYNMIMLTEFQRNMIKDLADLGLVKLQQGRKESWFIPTKLATNLSMSLTDSSSRKQGFVV
VETNFRMYAYSTSKLHCEIMRLFSRVEYQLPNLVVGAMTKESLYSAFENGITAEQIISFL
QQNAHPRVAERIPSVPENVTDQIRLWESDMNRVEMTPAHLYDEFPSRDVFEAACNFARDW
NGLLWEDSKRMRMVVKAEIHLNMREYLRGQK

NT seq 1356 nt +upstreamnt +downstreamnt
atgcctcaagtgaggatcattgctaagaatttcatggacatggtggcgtctttgcctgcc
atgaagctcgataagctttacaccaatcccttcatttgccaagccattctcaggtcattg
ccgcctttagcgaagaaatatgtggtacaaatattgtatattgatggtccagtagcagac
aaaacgctagaagaatggctacttcctgatggatcatctaagcacagagtagctattgat
cgattgacccagttgagaattttcactgagattgttgacaggaaaaaggaaatcagttac
aaattaaatcctacatttcagactaatctccagaagcatttaatagatgggggagttttg
cctggggaaccattggcttcaaatatcgctgtaagactcccaacattggaggaacttgat
acatatgcacttggacagtgggagtgtttcttgctgcatcttataaattcgggacatgca
gaaaggtcaactaactttagctcttctatgatgaaaatattccagcggggtcttttgact
caaagggacaaagaagctccacgattaactgagagtggtttccagtttctgctgatggat
acaaatgcacaactttggtatatcatcagagaatatatttctaactctgaggagcgtggt
ctggattcagcagatctgatttcctttttgctagagcttagttttcatatcactggtgag
gcatataatatgattatgttgactgaatttcagaggaatatgataaaggaccttgcagac
ttgggattggtgaaacttcagcagggcaggaaggagagttggtttatacctactaaatta
gctaccaatctctctatgagcttgacagattcatcatcacggaaacagggatttgttgtc
gtggaaacaaattttaggatgtatgcatactcaacgtctaagctgcattgcgaaattatg
cgtcttttctcaagggtagagtaccaacttccaaatcttgttgtcggggcaatgacgaaa
gaaagcttgtacagtgcttttgaaaatggcatcacagcagagcagataatttcttttctt
cagcagaatgcccatcctcgtgttgctgagagaataccttctgttcctgagaacgtcaca
gatcagataagactctgggagtcggacatgaacagggttgagatgacccctgcacatctc
tatgatgaattcccctctagggatgtctttgaggccgcttgtaactttgcacgagactgg
aatggtttactgtgggaagattcgaaaaggatgcgcatggtagtgaaggcagagattcac
ctgaacatgcgagagtatcttcgtggacagaagtaa

All links

Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (13)   

Download RDF

DBGET integrated database retrieval system