KEGG   Roseobacter denitrificans: RD1_0185Help
Entry
RD1_0185          CDS       T00376                                 

Gene name
dapE
Definition
succinyl-diaminopimelate desuccinylase (EC:3.5.1.18)
Orthology
K01439  
succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
Organism
rde  Roseobacter denitrificans
Pathway
Lysine biosynthesis
Metabolic pathways
Microbial metabolism in diverse environments
Biosynthesis of amino acids
Module
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:rde00001]
 Metabolism
  Overview
   01230 Biosynthesis of amino acids
    RD1_0185 (dapE)
  Amino acid metabolism
   00300 Lysine biosynthesis
    RD1_0185 (dapE)
Enzymes [BR:rde01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.18  succinyl-diaminopimelate desuccinylase
     RD1_0185 (dapE)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
RoseoBase: 
UniProt: 
Position
complement(182862..184007)
Genome map
AA seq 381 aa AA seqDB search
MPAVDPVRLTADLVRCASVTPADEGALDILHDVLSDAGFDCAWADRGGIRNLFARWGRKG
HPKTFGFNGHTDVVPIGNADDWSMPPFGAEVKDGIMYGRGTTDMKSGVAAFAAAAVDFVR
DTPPDGAIVLAITGDEEGDATDGTTALLAYMAAQGEQMSACLVGEPTCPDRMGEMIKIGR
RGSMTAWITFIGKQGHAAYPHRACNPLPALMRLMDRLASHKLDEGTEFFDPSTLAIVTVD
TGNPATNVIPASCSGTVNIRFNDAHSGASLTEWIKTELSRIEGEFGVQIDLRIKISGESF
LTPPGPLSALVSKAVKAQTGIEPVLSTTGGTSDARFVKDHCPVVEFGLVGQSMHQVDEHV
KTDHIVELKAIYSRILTDYFA
NT seq 1146 nt NT seq  +upstreamnt  +downstreamnt
atgcccgctgttgatcctgttcgtctgaccgctgatctggtccgttgcgcatccgtgacg
cctgccgatgagggcgcgctcgatatcctccacgacgtgctcagcgacgcggggtttgac
tgcgcatgggccgatcgcggtggcattcgcaacctcttcgcgcgctggggccgcaagggg
cacccaaagacctttggctttaacgggcatacggatgttgtaccaatcgggaatgccgat
gattggtccatgcccccgtttggcgctgaggtcaaagatggcatcatgtatgggcgtggc
accacggatatgaaatcaggcgttgcggcttttgccgccgctgcggtggatttcgtgcgc
gacacgccccccgatggggcgattgtgctggccatcaccggggatgaagaaggcgatgca
acagatggcacgaccgcgctgctggcctatatggcggcgcagggcgaacagatgagcgcc
tgtttggtcggcgagcccacgtgcccggatcgcatgggcgagatgatcaagataggccgc
cgtggatcaatgaccgcatggatcacattcatcggcaagcaggggcacgctgcctacccg
caccgcgcatgtaacccgctgcccgcacttatgcgcctgatggatcggctggccagccat
aagctcgatgagggcaccgagttttttgacccctcgacgcttgcgattgtcacggtggat
accgggaacccggccacgaacgtcattcccgccagttgctccggcacggtgaacatccgg
ttcaatgacgctcatagcggtgcatccctgaccgagtggatcaagacagaactgtccagg
atcgaaggtgaattcggggttcagatcgacctgcggatcaagatttcgggggagagcttc
ctgaccccgcccggccccctgtccgcgctcgtcagcaaggccgtcaaggcgcaaaccggg
atcgaaccggtgctcagcaccacggggggcacatcggatgcgcgctttgtcaaagatcac
tgccctgtggttgaattcggtctggtcggtcaatccatgcatcaggtcgatgagcacgtc
aaaaccgatcacatcgtcgagctgaaagcgatctattcgagaattctcaccgactatttt
gcatga

DBGET integrated database retrieval system