KEGG   Roseobacter denitrificans: RD1_0185Help
Entry
RD1_0185          CDS       T00376                                 

Gene name
dapE
Definition
succinyl-diaminopimelate desuccinylase (EC:3.5.1.18)
Orthology
K01439  
succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
Organism
rde  Roseobacter denitrificans
Pathway
Lysine biosynthesis
Metabolic pathways
Microbial metabolism in diverse environments
Biosynthesis of amino acids
Module
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Class
Metabolism; Overview; Biosynthesis of amino acids [PATH:rde01230]
Metabolism; Amino acid metabolism; Lysine biosynthesis [PATH:rde00300]
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
RoseoBase: 
UniProt: 
Position
complement(182862..184007)
Genome map
AA seq 381 aa AA seqDB search
MPAVDPVRLTADLVRCASVTPADEGALDILHDVLSDAGFDCAWADRGGIRNLFARWGRKG
HPKTFGFNGHTDVVPIGNADDWSMPPFGAEVKDGIMYGRGTTDMKSGVAAFAAAAVDFVR
DTPPDGAIVLAITGDEEGDATDGTTALLAYMAAQGEQMSACLVGEPTCPDRMGEMIKIGR
RGSMTAWITFIGKQGHAAYPHRACNPLPALMRLMDRLASHKLDEGTEFFDPSTLAIVTVD
TGNPATNVIPASCSGTVNIRFNDAHSGASLTEWIKTELSRIEGEFGVQIDLRIKISGESF
LTPPGPLSALVSKAVKAQTGIEPVLSTTGGTSDARFVKDHCPVVEFGLVGQSMHQVDEHV
KTDHIVELKAIYSRILTDYFA
NT seq 1146 nt NT seq  +upstreamnt  +downstreamnt
atgcccgctgttgatcctgttcgtctgaccgctgatctggtccgttgcgcatccgtgacg
cctgccgatgagggcgcgctcgatatcctccacgacgtgctcagcgacgcggggtttgac
tgcgcatgggccgatcgcggtggcattcgcaacctcttcgcgcgctggggccgcaagggg
cacccaaagacctttggctttaacgggcatacggatgttgtaccaatcgggaatgccgat
gattggtccatgcccccgtttggcgctgaggtcaaagatggcatcatgtatgggcgtggc
accacggatatgaaatcaggcgttgcggcttttgccgccgctgcggtggatttcgtgcgc
gacacgccccccgatggggcgattgtgctggccatcaccggggatgaagaaggcgatgca
acagatggcacgaccgcgctgctggcctatatggcggcgcagggcgaacagatgagcgcc
tgtttggtcggcgagcccacgtgcccggatcgcatgggcgagatgatcaagataggccgc
cgtggatcaatgaccgcatggatcacattcatcggcaagcaggggcacgctgcctacccg
caccgcgcatgtaacccgctgcccgcacttatgcgcctgatggatcggctggccagccat
aagctcgatgagggcaccgagttttttgacccctcgacgcttgcgattgtcacggtggat
accgggaacccggccacgaacgtcattcccgccagttgctccggcacggtgaacatccgg
ttcaatgacgctcatagcggtgcatccctgaccgagtggatcaagacagaactgtccagg
atcgaaggtgaattcggggttcagatcgacctgcggatcaagatttcgggggagagcttc
ctgaccccgcccggccccctgtccgcgctcgtcagcaaggccgtcaaggcgcaaaccggg
atcgaaccggtgctcagcaccacggggggcacatcggatgcgcgctttgtcaaagatcac
tgccctgtggttgaattcggtctggtcggtcaatccatgcatcaggtcgatgagcacgtc
aaaaccgatcacatcgtcgagctgaaagcgatctattcgagaattctcaccgactatttt
gcatga

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