KEGG   Roseobacter denitrificans: RD1_0204Help
Entry
RD1_0204          CDS       T00376                                 

Gene name
mutM
Definition
formamidopyrimidine-DNA glycosylase (EC:3.2.2.23)
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
rde  Roseobacter denitrificans
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:rde00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    RD1_0204 (mutM)
Enzymes [BR:rde01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     RD1_0204 (mutM)
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     RD1_0204 (mutM)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
RoseoBase: 
UniProt: 
Position
201887..202738
Genome map
AA seq 283 aa AA seqDB search
MPELPEVETVRRGLTPAMEGVVIARADVNRPDLRWPFPADMAARLTGKRVERLRRRSKYI
LMDLDSGETLLVHLGMSGRMLVSGDPLGQFVHSHPAPEKHDHVVFHMANNARITFNDPRR
FGAMDLMETASADTHKLLSVLGPEPLGNDFHESHLIEAFKNRNSPVKSVLLDQRIVSGLG
NIYVCEALFRAKIHPIRKAGKISGARVATLVPIIREVLAEAIEAGGSSLRDFKQADGELG
YFQHSFDVYGREGAPCKGEGCTGQIKRIVQSGRSSFYCAQCQR
NT seq 852 nt NT seq  +upstreamnt  +downstreamnt
atgcctgaactccccgaagtcgagaccgtgcgccgtggcctgaccccggcgatggagggc
gtcgtgatcgcccgggcggatgtgaatcgccctgatctgcgctggccctttcctgccgat
atggcggcgcggctgacgggcaaacgggtggagaggctgcggcgacggtcgaaatacatt
ctcatggacctcgatagcggggaaaccctgctggttcaccttgggatgtcgggccgtatg
ctggtatcgggggatccgctcgggcagtttgtccacagccatccggcgccggaaaaacac
gaccatgtggtgttccatatggccaataacgcgcgcatcacctttaacgacccgcgccgt
tttggcgcgatggacctgatggagacagccagtgcagatacgcataagctgctgtcggtg
ctcgggccggaaccgctgggcaatgactttcatgaatcacatctgattgaggcgttcaaa
aacaggaattcgccggtgaaatccgtcctgctggatcagcggatcgtatccggtctgggc
aatatctatgtgtgcgaggcgctttttcgcgcaaaaattcaccccatacgcaaagcgggc
aagatttctggcgcacgcgtcgccacgcttgtgccaattatccgcgaggtcctcgcagag
gccatcgaggcaggggggtcttccttgcgtgatttcaagcaagccgatggcgagcttgga
tattttcagcacagctttgatgtctacggacgggagggcgcgccctgcaagggggagggt
tgcacgggacaaatcaagcgaatcgtgcagtcaggacgctcatctttctattgcgcgcaa
tgccaaagatag

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