KEGG   Roseobacter denitrificans: RD1_0772
Entry
RD1_0772          CDS       T00376                                 
Symbol
groL
Name
(GenBank) chaperonin GroEL protein, putative
  KO
K04077  chaperonin GroEL [EC:5.6.1.7]
Organism
rde  Roseobacter denitrificans
Pathway
rde03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:rde00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    RD1_0772 (groL)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rde03019]
    RD1_0772 (groL)
   03110 Chaperones and folding catalysts [BR:rde03110]
    RD1_0772 (groL)
   03029 Mitochondrial biogenesis [BR:rde03029]
    RD1_0772 (groL)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rde04147]
    RD1_0772 (groL)
Enzymes [BR:rde01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.7  chaperonin ATPase
     RD1_0772 (groL)
Messenger RNA biogenesis [BR:rde03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     RD1_0772 (groL)
Chaperones and folding catalysts [BR:rde03110]
 Heat shock proteins
  HSP60 / Chaperonin
   RD1_0772 (groL)
Mitochondrial biogenesis [BR:rde03029]
 Mitochondrial protein import machinery
  Matrix
   Other matrix factors
    RD1_0772 (groL)
Exosome [BR:rde04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   RD1_0772 (groL)
  Exosomal proteins of other body fluids (saliva and urine)
   RD1_0772 (groL)
  Exosomal proteins of breast cancer cells
   RD1_0772 (groL)
  Exosomal proteins of colorectal cancer cells
   RD1_0772 (groL)
  Exosomal proteins of bladder cancer cells
   RD1_0772 (groL)
SSDB
Motif
Pfam: Cpn60_TCP1 Lar_N
Other DBs
NCBI-ProteinID: ABG30453
RoseoBase: RD1_0772
UniProt: Q16C40
Position
complement(747428..749059)
AA seq 543 aa
MSAKDVKFDTAARSRMLRGVNTLADAVKVTLGPKGRNVVIDKSFGAPRITKDGVTVAKEI
ELEDKFENMGAQMVKEVASRTNDQAGDGTTTSTVLAQAIVNEGMKAVAAGMNPMDLKRGI
DLATSKVVEAIKAAARDVKDSDEVAQVGTISANGEAEIGRQIADAMQKVGNDGVITVEEN
KGLETETEVVEGMQFDRGYLSPYFVTNPDKMTAELEDPFILIHEKKLSSLQPLVPLLESI
IQAGKPLLVIAEDVEGEALATLVVNKLRGGLKIAAVKAPGFGDRRKAMLQDIAILTGGQV
ISEDLGMKLESVTIDMLGTAKKVAITKDETTVVNGAGEKAEIDARVSQIRTQIEETTSDY
DREKLQERVAKLAGGVAVIRVGGMTEVEVKERKDRVDDALNATRAAVQEGIVVGGGVALV
QGAKALDGLQGANPDQNAGIAIVRRALEAPLRQIAENAGVDGSVVAGKIRESDDATFGFN
AQTEEYGDLFSFGVIDPAKVVRTALEDASSVAGLLITTEAMVAVKPAGKGAASPAMPDMG
GMM
NT seq 1632 nt   +upstreamnt  +downstreamnt
atgtctgcaaaggacgtcaaattcgataccgccgcccgctcccggatgctgcgcggcgtg
aacactttggccgatgcggtgaaagtgacgctcggccccaaaggccgcaatgtggtcatc
gacaagagcttcggcgcaccccgcatcaccaaggacggcgtgaccgtcgccaaggagatc
gagcttgaggacaagttcgaaaacatgggcgcgcaaatggtcaaggaagtggccagccgc
accaacgatcaggccggtgacggcaccacgacgtcgaccgttctggcgcaggccattgtc
aacgaaggcatgaaggccgtggccgcgggcatgaacccgatggacctcaagcgcggcatc
gatctggccacatcgaaggtcgtcgaagccatcaaggctgctgcccgtgacgtcaaagac
agcgatgaagttgcgcaagtcggcaccatctcggccaatggcgaagcggagatcgggcgt
cagatcgccgacgccatgcagaaagtgggcaatgacggcgtgatcaccgtcgaagaaaac
aagggccttgagaccgagaccgaggtcgtcgaaggcatgcagttcgaccgcggctacctg
tcgccttacttcgtgaccaaccccgacaagatgacagcagagctcgaggatccgttcatc
ctgatccacgagaagaaactgtcttcgctccagccgcttgtgccactgcttgagtccatc
attcaggcaggcaagccgcttctggtcattgccgaggacgtggaaggcgaagcgttggcg
acgctggtagtcaacaagctgcgcggcggcctgaagatcgcagccgtgaaagcaccgggc
ttcggtgatcgtcgcaaagccatgctgcaggacatcgcgatcctgacaggcggccaggtg
atctccgaagacctcggcatgaagctagagagtgttaccatcgacatgctcgggaccgcg
aagaaagtcgcgataaccaaggatgaaaccactgttgtaaatggtgccggtgagaaggcc
gagatcgacgcgcgtgtcagccaaatccgcacgcagatcgaagagaccacctccgactac
gaccgcgagaagctgcaggagcgtgtggccaaactcgcaggaggcgtcgccgtgatccgt
gtcggcggtatgactgaggtcgaggtgaaggaacgcaaggatcgtgtcgacgacgcgctc
aacgcaacccgcgccgctgtgcaggaaggcattgtcgtcggtggtggtgtcgccttggtt
caaggtgccaaggcactcgatggcttgcaaggcgcaaaccccgaccagaacgcaggcatc
gccatcgtgcgccgcgcgctggaagcaccgttgcgccagattgccgagaacgcgggcgtc
gatggttccgtggttgctggcaagatccgggaaagcgatgatgccaccttcggcttcaac
gcgcagaccgaagagtatggcgatctgttttccttcggtgtgatcgatccggcaaaagtt
gtgcgcacggcacttgaagacgcgtcatccgttgcgggcctgctcatcaccaccgaggcg
atggtagcggtcaaacctgccgggaaaggcgctgcatcccccgccatgcctgacatgggc
ggcatgatgtag

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Ontology (6)   
   KEGG BRITE (6)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (19)   
   KEGG ORTHOLOGY (1)   
   RefGene (15)   
   NCBI-PROTEINID (1)   
   OC (1)   
   ROSEOBASE (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (2)   
   Pfam (2)   
All databases (32)   

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