KEGG   Roseobacter denitrificans: RD1_1704
Entry
RD1_1704          CDS       T00376                                 
Symbol
soxA
Name
(GenBank) sarcosine oxidase, alpha subunit
  KO
K00302  sarcosine oxidase, subunit alpha [EC:1.5.3.24 1.5.3.1]
Organism
rde  Roseobacter denitrificans
Pathway
rde00260  Glycine, serine and threonine metabolism
rde01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:rde00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    RD1_1704 (soxA)
Enzymes [BR:rde01000]
 1. Oxidoreductases
  1.5  Acting on the CH-NH group of donors
   1.5.3  With oxygen as acceptor
    1.5.3.1  sarcosine oxidase (formaldehyde-forming)
     RD1_1704 (soxA)
    1.5.3.24  sarcosine oxidase (5,10-methylenetetrahydrofolate-forming)
     RD1_1704 (soxA)
SSDB
Motif
Pfam: GCV_T SO_alpha_A3 Fer2_4 GCV_T_C FAD_oxidored Pyr_redox_2 DAO FAD_binding_2 NAD_binding_8 HI0933_like Pyr_redox_3 GIDA Thi4 FAD_binding_3 Fer2_BFD AlaDh_PNT_C Pyr_redox DUF4147 Lycopene_cycl
Other DBs
NCBI-ProteinID: ABG31327
RoseoBase: RD1_1704
UniProt: Q169L6
Position
1636752..1639754
AA seq 1000 aa
MNEFRVEGRGRVNAEKPVKFIFDGEIYKGLEGDTVASALLANGVHLMGRSFKYHRPRGVV
TAGSEEPNALIGTMRGKGRFEPNTRATIQEIYEGLETESQNKWPTLQFDLGAINDRLYML
FSAGFYYKTFMWPRSFWDSVYEPLIRKAAGLGKAPTEVDPDHYASRYLHCDVLIVGAGPS
GIAAALTAGRAGSNVVLVDENSEMGGTLLSEPTVSIEGQSAWDWLAAAMKELDQMPNVRL
MTRTTAMGYYHQNMIGMVQKLTDHMADIPDGAPRERMWRVRAHEVVLSQGAIERPMVFDG
NDCPGVMMAGAAQTFLNRFGVLVGRRPVVLTSHDSAWYSAFDMADAGAEVVAIVDTRPDV
APSLVQQAMKRGIETLVGHTATGTKGRLRVKGLRVNPIKEGRVSYARMLSCDAVLVCGGW
TPSLHLFSHTKGSLDWDADAKAYLPGNKTEDVHIAGAGRGLWGVAAALEDGAKAGVDAVQ
ALGQTADTVTYKVTDDRTGTGITQKELPSDRSAGKAKAFVDFQNDVTAKDIRLAVREGMK
SIEHVKRYTTNGMATDQGKLSNMNGLMIASDALGKEAPQVGLTTFRPPYTPTTFGAFAGY
HKGKHFEVTRKTPIDGWAEENGAVFEPVALWRRAWYFPQAGEDMHKAVARECKATRESVG
MFDASTLGKIEVSGPDAVEFMNRMYTNPWTKLGVGRCRYGLLLGEDGFIRDDGVIGRIRD
DLFHVTTTTGGAASVLNMMEDYLQTEWPDLKVWLTSTTEEWATIALNGPNARKLLQPFVE
GADISADAMPHMALVECTVAGFPARLFRVSFTGELGFEINVPARHGLALWEKLHEAGQKF
DICTYGTETMHVLRAEKGFIIVGQDTDGTVTPQDAGIGWAIGKMKPDFVGKRSLDRPDIV
APRRKQLVGLLTEDPKTVLVEGAQIVANPKQPKPMKMIGHVTSSYWSETLGRSIAMAVVE
GGFDRMDETLHVPTEDGGSIPAKVTGTVFYDPAGDRLKVE
NT seq 3003 nt   +upstreamnt  +downstreamnt
atgaacgaatttcgtgtagaaggccggggccgtgtcaacgcggaaaagccggtaaaattc
atattcgacggcgaaatctacaaaggtcttgagggtgacacggtcgcatcggcgttgctg
gcgaatggcgttcacctgatggggcgcagtttcaaataccaccgcccgcgcggcgtggtg
actgctggttccgaagagccgaacgcgttgatcggaacaatgcggggcaagggtcggttt
gagccgaacacccgcgccacaattcaggaaatctatgaaggtcttgaaaccgaaagccag
aacaaatggccgaccttgcagtttgaccttggtgcgatcaacgaccggctttacatgctg
ttttccgccgggttttactacaagacctttatgtggccccgcagtttctgggacagcgtc
tatgagccactgatccgcaaggctgcgggtcttggcaaggccccgaccgaggtcgacccc
gaccattacgccagtcgctatctgcattgcgatgtcctgatcgtgggcgcgggcccttcg
gggattgctgcggcgctgacagcggggcgcgccggttccaatgttgttctggtcgacgaa
aacagcgaaatgggcggtactttgctctctgaacctacggtttcgattgaggggcagagc
gcgtgggactggctcgccgccgcgatgaaagaactcgatcagatgcccaacgtgcgcctg
atgacgcgcaccacggcgatgggatactatcaccagaacatgatcggcatggtgcagaaa
ctgaccgatcacatggccgatattcctgatggcgcaccgcgtgaacgcatgtggcgggtg
cgtgcgcatgaggtcgtattgtcgcagggcgcgatcgagcggcctatggtttttgacggt
aacgactgccccggcgtgatgatggcgggtgcggcgcagacctttttgaaccgctttggc
gttctggtcggcaggcggcccgtggtgctgaccagccatgacagcgcttggtacagtgcc
tttgacatggcggatgcaggcgcggaagtcgtggcgattgtcgacacccggcctgatgtt
gcgccctcgcttgtgcagcaggcgatgaagcgcgggatcgaaacgctggtgggacataca
gcgaccggcacaaagggccgtttgcgcgtcaaggggctgcgggttaacccgatcaaggag
ggccgtgtgagttatgcgcggatgctgtcctgtgacgcggtgctggtctgtggtgggtgg
acaccgtcgctgcatctgttctcgcacaccaaagggtccctcgattgggatgcggacgcc
aaagcctatctgcccggcaacaagaccgaagacgtccacattgcgggtgcggggcgcggc
ctctggggtgtcgccgccgcgcttgaggatggcgcaaaggcgggcgttgacgcggtgcag
gcgctggggcagacggcggatacggtgacgtataaggtgaccgatgaccgtaccggcacc
ggcatcacgcaaaaagaactgcccagtgatcgcagtgcgggcaaggccaaggcctttgtc
gatttccagaacgatgtgaccgccaaggacatccgtctggcggtgcgcgagggcatgaaa
tccatcgaacacgtcaaacgctacacgacaaacgggatggcaacggatcagggcaaactg
tcgaatatgaacggtctgatgattgcgtccgacgccttgggcaaggaggccccgcaagtt
ggtctgacgaccttccgcccgccctacaccccgacaacattcggcgcctttgcgggttat
cacaaaggcaagcatttcgaagtgacacgcaagacacccatcgacggctgggccgaagaa
aacggtgcagtgtttgagccggtcgcgctgtggcggcgcgcgtggtatttcccgcaagcc
ggtgaagacatgcacaaggctgttgcgcgcgaatgcaaggcgacccgggaaagtgtcggc
atgttcgacgcctccaccttgggtaaaatcgaggtgtccggcccggatgcggtcgaattc
atgaatcggatgtacaccaatccctggaccaaactgggcgtggggcggtgccgctatggc
ctgctgctgggggaggacggctttatccgcgatgacggtgtcatcgggcggatacgggac
gatctgttccatgtgacaaccacgacgggcggtgccgccagcgtgttgaacatgatggag
gattacctccagacggaatggcccgacctgaaggtctggctgacctccaccacggaggaa
tgggccaccatcgcgctgaacggtccgaacgcgcgcaaattgttgcagcccttcgttgaa
ggcgcggatatctccgccgatgcgatgccgcatatggcgcttgtcgaatgcacggttgcc
ggttttcccgcgcgcctgttccgggtgagctttaccggagagctgggctttgagatcaac
gtgcctgcgcgccatggtcttgccctttgggaaaaactgcatgaggcggggcagaaattc
gatatctgcacctatggcactgaaaccatgcacgttttgcgcgctgaaaagggctttatc
atcgtcggtcaggatacggatggcaccgtcacgccgcaggatgcgggcatcggttgggcc
atcggcaagatgaagcctgatttcgttggcaagcgttcactggatcgccctgacatcgtg
gcgccgaggcgtaaacaacttgtcggcttgctgacagaggatcccaaaaccgtgctggtg
gaaggcgcgcagatcgtggcgaacccaaagcagcccaagccgatgaaaatgatcggtcat
gtgacctcgtcctactggtctgaaacactgggccgttcgatcgccatggccgttgtcgaa
ggcgggtttgatcgcatggatgaaacgctgcatgtcccgaccgaagacggggggagcatt
cctgccaaagtcaccggaaccgtattttatgacccggcgggcgaccgcctgaaggttgaa
tga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (2)   
   KEGG MODULE (1)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (4)   
   KEGG ENZYME (2)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (17)   
   KEGG ORTHOLOGY (1)   
   RefGene (13)   
   NCBI-PROTEINID (1)   
   OC (1)   
   ROSEOBASE (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (19)   
   Pfam (19)   
All databases (55)   

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