KEGG T00376: RD1

Roseobacter denitrificans: RD1_2961

Entry

RD1_2961 CDS T00376

Gene name

tpiA

Definition

triosephosphate isomerase (EC:5.3.1.1)

Orthology

K01803

triosephosphate isomerase (TIM) [EC:5.3.1.1]

Organism

rde Roseobacter denitrificans

Pathway

rde00010	Glycolysis / Gluconeogenesis
rde00051	Fructose and mannose metabolism
rde00562	Inositol phosphate metabolism
rde01100	Metabolic pathways
rde01110	Biosynthesis of secondary metabolites
rde01120	Microbial metabolism in diverse environments
rde01230	Biosynthesis of amino acids

Module

rde_M00002

Glycolysis, core module involving three-carbon compounds

Class

Metabolism; Carbohydrate metabolism; Glycolysis / Gluconeogenesis [PATH:rde00010]
Metabolism; Carbohydrate metabolism; Fructose and mannose metabolism [PATH:rde00051]
Metabolism; Carbohydrate metabolism; Inositol phosphate metabolism [PATH:rde00562]

SSDB

Motif

Pfam:

TIM

Other DBs

NCBI-GI:

NCBI-GeneID:

RoseoBase:

UniProt:

Position

2838631..2839377

AA seq 248 aa
MQRKLAAGNWKMNGTVADLSMIDSLNSAHPNPGCEILLCPPAHLLSQAVAQARTGPVRIG
AQNCHSADTGAYTGDISAPMLADVGASHVIVGHSERREGYGETDADVKDKAAAAQAAGLT
PILCIGESLEQREAGAALDVIRAQLAGSVPGNNTAETLVVAYEPIWAIGTGKIPTMEEIA
QVHAVLRADLIDALGTTGATVPLLYGGSVKPGNAAGIFALDHVNGALVGGASLTAQDFSP
IIEALSDS

NT seq 747 nt +upstreamnt +downstreamnt
atgcagcgtaaactcgcggcgggaaactggaaaatgaacggcaccgtcgcggacctgtcc
atgattgacagcctgaacagcgcgcatccaaatcccggctgtgaaattctgctctgcccc
cctgcgcatctgttgtcgcaagcggtcgcgcaagcccgcacaggacccgtccggattggt
gcgcagaattgccattctgctgacaccggcgcttacacgggcgatatctcggcccccatg
cttgcggacgtcggcgcaagccatgtcatcgtcggccactccgagcgccgcgaaggatat
ggcgaaaccgatgcagatgtgaaggacaaggctgcagccgcgcaagcagcgggtctgacc
ccgatcctatgcatcggcgaaagccttgagcagcgcgaggcaggcgctgcgctggacgtc
atacgggcgcaactggcaggttcagtacccggcaacaacaccgccgagacgctcgtcgtc
gcctatgaacccatatgggcgatcggcaccggcaaaatcccgaccatggaagagatcgca
caggtacacgcggtcctgcgtgcagatctgatcgacgcactggggacaaccggtgccacg
gttcccctgctctatggcgggtccgtcaaaccgggcaatgcggccggaattttcgcgctg
gatcatgtgaacggggcgctcgtagggggcgcgagcctgaccgcgcaggatttctctccc
atcatcgaagcactgtccgacagttga

All links

Pathway (8)   
   KEGG PATHWAY (7)   
   KEGG MODULE (1)   
Chemical substance (2)   
   KEGG COMPOUND (2)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
   ROSEOBASE-RDE (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (21)   

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