KEGG   Roseobacter denitrificans: RD1_3052
Entry
RD1_3052          CDS       T00376                                 
Symbol
rrmJ
Name
(GenBank) ribosomal RNA large subunit methyltransferase, putative
  KO
K02427  23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
Organism
rde  Roseobacter denitrificans
Brite
KEGG Orthology (KO) [BR:rde00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:rde03009]
    RD1_3052 (rrmJ)
Enzymes [BR:rde01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.166  23S rRNA (uridine2552-2'-O)-methyltransferase
     RD1_3052 (rrmJ)
Ribosome biogenesis [BR:rde03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    RD1_3052 (rrmJ)
SSDB
Motif
Pfam: FtsJ Methyltransf_23 Methyltransf_31 CMAS
Other DBs
NCBI-ProteinID: ABG32565
RoseoBase: RD1_3052
UniProt: Q164M8
Position
complement(2922661..2923383)
AA seq 240 aa
MAKKPGSQNTSGRGQRDLKVKVKTARGRKLSSTRWLQRQLNDPYVKRARSEGYRGRAAYK
ILELDDRFRFLVPGARVVDLGCAPGGWCQVAVKRVNALGERTSKAQGSVLGVDLQEMEPI
AGATLYQLDFMADDADEQVRVWLGGKADVVMSDMAASSSGHKQTDHLRIIALCEAAAYFA
FDVLEEGGTFVAKVLAGGAEGELQKLLKQRFAKVANIKPPASRQDSSEKFVVATGFRAKA
NT seq 723 nt   +upstreamnt  +downstreamnt
atggcgaaaaaaccgggcagtcaaaatacatcggggcgcgggcagcgtgatctgaaggtc
aaggtcaagaccgcgcgcgggcgcaagctgagttcaacgcgctggcttcagcgtcagttg
aacgacccatatgtaaaacgcgcccgcagtgaggggtatcgcgggcgggcggcctataag
atactggagttggatgacaggttccggtttctggtgccgggtgcgcgtgtggtggatctg
ggctgtgcgcccggtggctggtgtcaggtggcggtcaagcgcgtgaatgcgctgggagag
cggacaagcaaggcgcagggcagcgttctgggggttgatctgcaggagatggagccgatc
gcgggcgcgacgctctatcagctggatttcatggccgatgacgcggatgaacaggtgcgc
gtctggttgggtggcaaggccgatgtggtgatgtccgatatggccgcgtcaagctcgggg
cacaagcagacggaccatttgcgcatcatagcgctatgcgaagcggcggcatattttgca
tttgatgttctggaggagggcggcacctttgtcgcgaaagtgctcgcaggtggggcggaa
ggtgagttgcaaaagctgctgaagcaacggtttgcaaaggttgccaacatcaaacccccg
gcctcccggcaggacagttcggagaaatttgtcgtcgcaactggctttcgcgctaaagcc
tga

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