KEGG   Roseobacter denitrificans: RD1_3434
Entry
RD1_3434          CDS       T00376                                 
Name
(GenBank) dimethylglycine dehydrogenase, putative
  KO
K00315  dimethylglycine dehydrogenase [EC:1.5.8.4]
Organism
rde  Roseobacter denitrificans
Pathway
rde00260  Glycine, serine and threonine metabolism
rde01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:rde00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    RD1_3434
Enzymes [BR:rde01000]
 1. Oxidoreductases
  1.5  Acting on the CH-NH group of donors
   1.5.8  With a flavin or flavoprotein as acceptor
    1.5.8.4  dimethylglycine dehydrogenase
     RD1_3434
SSDB
Motif
Pfam: GCV_T DAO GCV_T_C FAO_M FAD_binding_2 FAD_binding_3 NAD_binding_8 ApbA Pyr_redox_3 Pyr_redox_2 ThiF NAD_binding_9 Shikimate_DH TrkA_N Thi4 Pyr_redox
Other DBs
NCBI-ProteinID: ABG32925
RoseoBase: RD1_3434
UniProt: Q163B8
Position
complement(3297893..3300394)
AA seq 833 aa
MKTQVKALVVGGGAVGTSIAYHLARAGWDDVMLLERDELTSGSTWHAAGLLPYFNMSFAT
THIHDYSIRFYKTLEEETGLNAGFAVVGNLRMAQTQERMDEYMLYASTAETCGVPYQWMT
PDEIKAKWPLIRTDDLKGALYHHTDGYINPADVTMAMAKGARQRGVAIERKWQADAFHWT
GNHWEVTATKMVEKGGNLVPSDEQVVITAEHVVTASGNHAQRTAQMLGIKIPAIPVEHQF
IVMDKDPDLVKFRAEGHVEHPVIRDADAQSYVREERGGWILGVYEQNAPARFEYGVPDSF
RADLFQLDLERIEEQYLAMIHRIPSCEESGLKDDFNGPICYTPDGNPLVGPAPGLRNMWL
AEGFSFGITAAGGTGYYLAQMMVEGEAEIDMASLDPKRYGDWMTTEFAARKNEECYSHVY
ILHHPDEERPACRPLRTSPAYDRQAARGAQFGWVNGWERPNYFGPLDAPESFDHDARSFR
RGGWWQYAVDEAKAIREGVGLIDATAFTKHLLKGPGATQFLDWFTCNKLPKVGRINLTYA
LTGHGTTRTEYTIVRLGEDEYYLVSAGAWTAYDADYLRKAIEDKAPEFGYIECHDVTTQW
GVFAIAGPKSRDVLNALVKDAEPSTVLSNKRFPWLSMRNIELGMCPVRAIRVAYTGELGW
ELHHPIEMQNYLFDQLEKAGEEHGMKLVGARAQNWLRQEKSYRAFGTELGRDATPLEADL
PRFIDLSKEFHGKARLEETGVRSICVTLLIDGPPDADPWGREALYHGDTRVGRLTSGGYS
VAFGKSIGMGYVNPDLAVPGTRLKVKMLDQLWDAEITEDSPYDPRNERIRMDG
NT seq 2502 nt   +upstreamnt  +downstreamnt
atgaaaacccaagtcaaagcactggttgtcgggggcggtgccgtcggcacgtccattgcc
tatcacctcgcccgcgcgggctgggacgatgtgatgctgctggaacgcgacgagttgaca
tcaggttcgacatggcatgcggcgggcctcttgccctatttcaacatgtcctttgcgacc
acccacatccatgattattcgatccggttttacaagacgttggaagaggaaaccgggctg
aatgcaggctttgccgtggtgggcaacctgcgcatggcacagacgcaggaacggatggat
gaatacatgctctatgcctccaccgctgaaacctgcggcgtgccttaccagtggatgacg
cctgacgagatcaaggcaaaatggccgctgatccggacggatgacctcaagggcgcgctc
tatcaccatacggatggctacattaaccctgccgatgtcacgatggcgatggccaagggc
gcgcgccaacggggcgtggcgattgaacgcaaatggcaggcggatgcctttcactggacc
ggcaaccattgggaagtgaccgctaccaagatggtggaaaagggcggcaatctcgtgccc
tcggacgaacaggtcgtgattacggcagaacatgtggtgacggcttcgggcaaccatgcg
cagcgcacggcacaaatgctcggcatcaagatccccgcgatccccgttgagcatcagttt
atcgtcatggataaggaccccgatctggtgaaattccgcgccgaggggcatgtcgaacac
ccggtgatccgtgatgcggatgcgcaatcctatgtgcgtgaggaacgcggcggctggatt
ttgggcgtgtacgagcaaaacgcgcctgcgcggttcgaatatggcgtgcctgacagcttc
cgggcggatctgtttcaactcgaccttgagcggatcgaagagcaatatcttgccatgatc
caccgtattccgtcctgcgaagaaagcggtctcaaggatgatttcaacggcccgatctgc
tacacgccggatggcaatccgctggtcggacccgcaccgggcttgcgcaacatgtggctg
gccgaagggttttcgttcgggatcacggcggcgggcggcacgggctattaccttgcgcaa
atgatggtcgagggcgaagccgagatcgacatggcgagccttgatcccaaacgctacggc
gattggatgaccacggaatttgccgcccgcaagaacgaagaatgctacagccacgtctat
atcctgcaccacccggatgaagaacgcccggcctgtcgccccttgcgcacctcgcccgcc
tacgaccggcaagccgcgcgcggcgcgcaattcggctgggtgaacggttgggagcgcccg
aattatttcggcccgctggatgcgcctgaaagtttcgatcacgatgcgcggtcattccgg
cgcggcggttggtggcaatacgccgtggacgaggccaaggcgatccgcgagggcgtgggc
ctgattgatgccaccgcctttaccaaacatctgctcaaagggccgggggcgacgcagttt
cttgactggttcacctgcaacaaattgcccaaagtggggcggatcaacctgacctatgcg
ctgacaggtcacgggacgacacgcacggaatataccatcgtgcgtctgggtgaggatgag
tattacctcgtctccgcaggggcctggacggcttatgacgcggattacctgcgcaaggcg
attgaggataaagcgcccgagtttggctatatcgaatgccatgacgtgaccacgcagtgg
ggtgtttttgccatcgccgggccgaaatcacgcgatgtgttgaacgcgctggtcaaggac
gcggagccgtccacggtgctgtccaacaagcgctttccgtggctgagcatgcgcaacatt
gagttgggcatgtgccctgtgcgcgcaatccgcgtcgcctataccggggaattgggctgg
gagttgcaccacccgatcgagatgcagaattacctgtttgatcagcttgaaaaggccggt
gaagagcacggtatgaaactggtgggcgcgcgggcgcaaaactggctgcggcaggagaaa
tcctatcgtgccttcggcacagagcttggccgcgacgccaccccgctggaggcggacctg
ccgcgtttcattgacctgagcaaggagttccatggcaaagcacgccttgaagaaaccggt
gtgcgctcaatatgcgtgacactgctgattgatggcccgccggatgcggacccctggggg
cgtgaggcgctttatcatggggacacgcgggtggggcggcttacgtccggcggctattcc
gtggctttcggtaaatccatcggcatgggctatgtcaaccctgatctggccgttcccggc
acccggctcaaggtgaagatgctggaccagttgtgggatgccgagataaccgaagacagc
ccctatgacccccgaaacgaacgcatccgtatggatggttag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (4)   
   KEGG PATHWAY (2)   
   KEGG MODULE (2)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (45)   
   KEGG ORTHOLOGY (1)   
   RefGene (41)   
   NCBI-PROTEINID (1)   
   OC (1)   
   ROSEOBASE (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (16)   
   Pfam (16)   
All databases (77)   

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