KEGG T00376: RD1

Roseobacter denitrificans: RD1_3705

Entry

RD1_3705 CDS T00376

Gene name

xylA

Definition

xylose isomerase (EC:5.3.1.5)

Orthology

K01805

xylose isomerase [EC:5.3.1.5]

Organism

rde Roseobacter denitrificans

Pathway

rde00040	Pentose and glucuronate interconversions
rde00051	Fructose and mannose metabolism
rde01100	Metabolic pathways

Class

Metabolism; Carbohydrate metabolism; Pentose and glucuronate interconversions [PATH:rde00040]
Metabolism; Carbohydrate metabolism; Fructose and mannose metabolism [PATH:rde00051]

SSDB

Motif

Pfam:

AP_endonuc_2

Other DBs

NCBI-GI:

NCBI-GeneID:

RoseoBase:

UniProt:

Position

3575033..3576334

AA seq 433 aa
MTDFFKDIPAIRYEGPDTENEFAFRHYNPDEVVMGKTLKDHLRFACAYWHSFAWPGGDPF
GGQTFERPWFGDTMELAKLKADVAFDMFERLGVPYFCFHDADVRPEGDTFAESTKNLEEI
TDYFAEKMDATGVKLLWGTANLFSHRRFMAGAATNPDPEVFAYSAATIKSCMDATRKLGG
ENYVLWGGREGYETLLNTDMARERAQAGRMLQMVVDYKHKTGFAGTILIEPKPQEPTKHQ
YDYDVATVYGFLKDFGLEGEVKVNIEQGHAILAGHSFEHELALARALGIFGSIDMNRNDY
QSGWDTDQFPNNVPEMALAYYEVLRAGGFDTGGTNFDAKLRRQSLDPADLILAHVGGMDA
CAAGLKAAAAMLEDGKLEAAREARYAGWSEGLGQKLLTSDLAEISDLVIAKGINPQPRSG
RQERLENLVNKYL

NT seq 1302 nt +upstreamnt +downstreamnt
atgaccgatttcttcaaggacatccccgccatccgctatgagggacccgataccgagaac
gaatttgcgttccggcactataatccggatgaggtcgtcatgggcaagacgctcaaggat
cacttgcggtttgcctgcgcctattggcacagttttgcatggccgggcggcgaccccttt
ggcgggcagacctttgagcgtccgtggttcggggacacgatggagctggcgaaactcaag
gcggacgtcgcctttgacatgtttgaacgtctgggcgtgccctatttctgttttcacgat
gcagacgtacgccccgaaggcgacacctttgccgaaagcaccaagaacctcgaagaaatc
accgactatttcgccgaaaaaatggacgcaacaggcgtcaaactgctgtggggaacggcc
aatctgttctcgcatcgccgctttatggccggggcggcgaccaatcccgaccccgaggtt
tttgcctattccgccgcgacgatcaaatcctgcatggatgcgacccggaaactgggcggc
gagaactatgtgctctggggcgggcgcgaaggctatgaaacgctgctcaacaccgacatg
gcccgcgaacgcgcgcaggcgggccgtatgttgcaaatggtggtcgattacaagcacaag
accggttttgcaggcaccatcctgatcgaacccaaaccgcaggaaccgaccaagcaccag
tatgattacgatgtggcgacggtctatggcttcctcaaggatttcggcctcgaaggtgag
gtcaaagtcaacatcgaacagggccatgccattcttgcaggccatagttttgaacatgag
ttggcgctcgcacgggcactggggattttcggctcgatcgacatgaaccgcaatgactac
caatccggctgggataccgaccagtttccaaacaatgtccccgagatggcgcttgcctat
tacgaagttctgcgcgccgggggcttcgacacagggggcaccaattttgatgccaagctg
cgccggcaatcgcttgacccggcggatctgatccttgcgcatgtgggtggtatggatgca
tgcgctgcggggttaaaggccgctgcggccatgctggaggatggcaagctagaggccgcg
cgcgaggcgcgctatgcaggctggtcagaaggtttggggcaaaaactgctgacctctgat
ctggcggagatatcagatctggtgattgcaaaaggcatcaacccacagccccgctcagga
cggcaggagcggctggaaaatctggtgaacaaatacctttaa

All links

Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
   ROSEOBASE-RDE (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (19)   

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