KEGG T00376: RD1

Roseobacter denitrificans: RD1_3765

Entry

RD1_3765 CDS T00376

Gene name

xylA

Definition

xylose isomerase (EC:5.3.1.5)

Orthology

K01805

xylose isomerase [EC:5.3.1.5]

Organism

rde Roseobacter denitrificans

Pathway

rde00040	Pentose and glucuronate interconversions
rde00051	Fructose and mannose metabolism
rde01100	Metabolic pathways

Class

Metabolism; Carbohydrate metabolism; Pentose and glucuronate interconversions [PATH:rde00040]
Metabolism; Carbohydrate metabolism; Fructose and mannose metabolism [PATH:rde00051]

SSDB

Motif

Pfam:

AP_endonuc_2

Other DBs

NCBI-GI:

NCBI-GeneID:

RoseoBase:

UniProt:

Position

complement(3646755..3647741)

AA seq 328 aa
MKDPNTPLFAARLNAFKIGADAYWPGKNTVTTADLLGRAATAGLTAADLNYPDHFVSDTP
AQLTEALQGNGMVLNGMAMRYYTDPGYKLGAFTHPDASVRRAAIDETKRGLDVLAQMGGR
LMTLWMGQDGFDYSFQMDYTRAWDHTITAITEVADHNPTLDIALEYKPNEPRAFALMPDA
ATTLLALREVDRPNTGVTLDFAHVLYADEMPAFAAALVARHSRILGVHLNDGYGKWDNGL
MVGAVHPVQTIELLVELTRAGYDGAIYFDTFPDHSGLDPVAEARTNIDVVNRLRAIAQGL
AGDADLQAAIARQDAPLSMRLVQAAMLK

NT seq 987 nt +upstreamnt +downstreamnt
atgaaagatcccaacacccccctttttgcagcccggctgaatgctttcaagatcggtgct
gacgcctattggcccggcaaaaacacggtcacaactgccgatctgctgggccgcgcggcc
acggcagggctgacagcggcggatttgaattaccccgatcacttcgtcagcgatacgcct
gcgcaactgaccgaggccttgcagggcaacggcatggtgctcaacggcatggccatgcgg
tactacaccgacccgggctataaactgggggccttcacgcatcccgatgccagcgtccgg
cgcgcggccatagatgaaaccaaacgcgggctcgatgtgctggcgcagatgggcgggcgt
ctgatgacgctctggatggggcaggacgggttcgattattcgttccagatggattacaca
cgcgcatgggaccacacgatcaccgcgatcactgaggttgccgatcacaacccgaccctt
gatatcgcgttggaatataaacccaatgagccgcgcgcctttgccctgatgcccgatgcg
gccacgacccttcttgcgctcagggaggttgaccggcccaataccggtgtaactcttgat
tttgcccatgtgctttatgccgacgagatgcccgcttttgccgccgccctcgtggcgcgt
cattcgcgcatcctcggtgtgcatcttaacgatggctacgggaaatgggacaacgggctg
atggtgggggccgtgcatccggtgcagaccattgaactgctcgtggaactgacgcgcgca
gggtatgatggggcgatttatttcgataccttcccggaccattccggtcttgacccggtg
gcagaggcgcgcaccaatatcgacgtggtgaaccggctgcgcgcgattgcgcaggggctt
gccggggatgctgatctgcaagcggccatcgcccgacaggatgcgcccctgtccatgcgg
ctggtacaggcggccatgctgaaatga

All links

Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
   ROSEOBASE-RDE (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (19)   

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