KEGG T00376: RD1

Roseobacter denitrificans: RD1_3895

Entry

RD1_3895 CDS T00376

Gene name

trpA

Definition

tryptophan synthase subunit alpha (EC:4.2.1.20)

Orthology

K01695

tryptophan synthase alpha chain [EC:4.2.1.20]

Organism

rde Roseobacter denitrificans

Pathway

rde00260	Glycine, serine and threonine metabolism
rde00400	Phenylalanine, tyrosine and tryptophan biosynthesis
rde01100	Metabolic pathways
rde01110	Biosynthesis of secondary metabolites
rde01230	Biosynthesis of amino acids

Module

rde_M00023

Tryptophan biosynthesis, chorismate => tryptophan

Class

Metabolism; Amino acid metabolism; Glycine, serine and threonine metabolism [PATH:rde00260]
Metabolism; Amino acid metabolism; Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:rde00400]

SSDB

Motif

Pfam:

Trp_syntA BtpA His_biosynth PcrB NanE

Other DBs

NCBI-GI:

NCBI-GeneID:

RoseoBase:

UniProt:

Position

3763301..3764092

AA seq 263 aa
MTRIDDKFAQLAKDGKKAFVAYVMAGDPNYETSLEVVKGLPAAGVDVIELGLPFTDPMAD
GPTIQLAGQRALEAGMTLQKTLDLARAFRKDDQTTPIVMMGYYNPIYSRGVDRFLAEAKD
AGIDGLIVVDLPPEEDSELCLPAQAAGLNFIRLATPTTDDKRLPRVLQNTSGFVYYVSIT
GITGAAEAQAVDVGPEVARIKSAAALPVIVGFGVNTPEKSKAIAEVADGVVVGSAIVGKI
GAGQSVSDVLAFVKTLADGAHSV

NT seq 792 nt +upstreamnt +downstreamnt
atgacccgtatcgacgacaaattcgcccagcttgccaaggacggcaagaaagccttcgtg
gcctatgtgatggcgggtgatccgaactatgaaacctcgctggaagtcgtcaaagggttg
cctgcggcgggggtggatgtgatcgaactgggcctgccttttacggacccgatggcggac
gggccgaccatccaactggccggtcaacgcgcactggaggcgggcatgacgctgcaaaag
acgctggacctcgcccgcgcctttcgcaaggacgaccagacaacccccatcgtgatgatg
ggctattacaatccgatctacagccgcggcgttgatcgttttctggccgaggccaaggac
gcgggcattgatggattgatcgttgtggatttgccaccggaggaagacagcgaattgtgt
ctgcccgcgcaagccgccggtctgaacttcatccgattggcaacgcccaccaccgatgac
aagcgcctgccgcgcgttttgcaaaacacctccggttttgtctattatgtctcgatcacg
ggcatcaccggtgcggccgaagcgcaagcggtcgatgtcggccccgaagtggcgcgtatc
aaatccgccgccgccctgcccgtaatcgtcggtttcggcgtgaacacccctgaaaagtcc
aaagccatcgcagaggtggccgacggcgtggtcgtggggtccgccattgtcggaaagatc
ggcgcaggccaaagcgtttcggatgttctggcctttgtcaaaacactcgcagacggcgcc
cacagcgtgtga

All links

Pathway (6)   
   KEGG PATHWAY (5)   
   KEGG MODULE (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (4)   
   KEGG ENZYME (1)   
   KEGG REACTION (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
   ROSEOBASE-RDE (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (29)   

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