KEGG   Roseobacter denitrificans: RD1_3906Help
Entry
RD1_3906          CDS       T00376                                 

Gene name
trpB
Definition
tryptophan synthase subunit beta (EC:4.2.1.20)
Orthology
K01696  
tryptophan synthase beta chain [EC:4.2.1.20]
Organism
rde  Roseobacter denitrificans
Pathway
Glycine, serine and threonine metabolism
Phenylalanine, tyrosine and tryptophan biosynthesis
Metabolic pathways
Biosynthesis of secondary metabolites
Biosynthesis of amino acids
Module
Tryptophan biosynthesis, chorismate => tryptophan
Brite
KEGG Orthology (KO) [BR:rde00001]
 Metabolism
  Overview
   01230 Biosynthesis of amino acids
    RD1_3906 (trpB)
  Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    RD1_3906 (trpB)
   00400 Phenylalanine, tyrosine and tryptophan biosynthesis
    RD1_3906 (trpB)
Enzymes [BR:rde01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.20  tryptophan synthase
     RD1_3906 (trpB)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: 
Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
RoseoBase: 
UniProt: 
Position
complement(3771597..3772829)
Genome map
AA seq 410 aa AA seqDB search
MANDLFNSFMTGPDENGRFGDFGGRFVSETLMPLILELEEQYENAKTDESFWAEMNDLWT
HYVGRPSPLYFAERLTDHLGGAKVYMKRDELNHTGAHKINNVLGQIILARRMGKTRIIAE
TGAGQHGVATATVCAKFGLKCVVYMGAHDVERQAPNVFRMRLLGAEVVPVTSGRGTLKDA
MNDALRDWVTNVRDTFYCIGTVAGPHPYPAMVRDFQAIIGKEVRTQMTAAEGRFPDTVIA
AIGGGSNAMGLFYPFLDDKEVGIIGVEAGGKGVNAKMEHCASLTGGRPGVLHGNRTYLLQ
DDDGQILEGFSISAGLDYPGIGPEHAWLHDIGRAQYVSITDVEALEAFQLCCELEGIIPA
LEPSHALAHVMKIAPDLPSDHIICMNMCGRGDKDIFTVAKALGFEMGEFA
NT seq 1233 nt NT seq  +upstreamnt  +downstreamnt
atggccaatgatcttttcaattctttcatgacgggtccggatgaaaacggacgttttggc
gatttcggggggcgctttgtctccgagacgctgatgccgctgattctggagttggaagag
caatatgaaaacgccaagacggatgaaagtttctgggccgaaatgaatgacctgtggacc
cattacgtgggccgacccagcccgctttattttgccgaacgcctgacggatcatctgggc
ggcgcaaaggtctatatgaaacgtgatgagctgaaccataccggcgcgcacaagatcaac
aacgtgctgggccagatcattctggcgcgccggatgggcaaaacgcgcatcattgcggaa
acgggcgcgggtcagcatggcgtggccacggcgacggtctgtgcaaagttcggtttgaaa
tgtgtcgtctacatgggcgcgcatgacgttgaacggcaggccccgaatgtgttccgcatg
cggcttctgggggctgaggttgtgccggtaacctccggtcgtgggacgctgaaggatgcg
atgaacgacgccctgcgcgactgggtgaccaatgtgcgcgacacgttttactgcatcggg
acggttgcgggtccacatccttaccctgccatggtgcgggattttcaggcgatcatcggc
aaggaagtgcgcacgcaaatgaccgctgcggagggccgcttcccggatacggtgatcgca
gcgatcgggggcgggtccaatgccatgggcctgttctatccgtttctcgacgacaaggag
gttggcatcatcggcgtcgaggcgggcggcaaaggcgtcaatgccaagatggagcattgc
gcatcgctgacaggcgggcggcccggcgtgctgcatggcaaccggacgtatctgttgcag
gatgatgacggtcagattctcgaagggttctcaatttcggcgggtctggattacccgggc
atcgggccggaacatgcatggctgcatgacatcgggcgcgcgcaatatgtgtcgatcacg
gatgtcgaagcgcttgaggcgtttcagttgtgctgcgaacttgaaggcatcatcccggcg
ctggaacccagccacgcgctggcccatgtgatgaaaatcgcacctgacctgccatctgac
cacatcatctgcatgaacatgtgcgggcgtggcgacaaggatatctttaccgttgccaaa
gcgcttgggttcgagatgggggagtttgcctga

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