KEGG   Roseobacter denitrificans: RD1_3906Help
Entry
RD1_3906          CDS       T00376                                 

Gene name
trpB
Definition
tryptophan synthase subunit beta (EC:4.2.1.20)
Orthology
K01696  
tryptophan synthase beta chain [EC:4.2.1.20]
Organism
rde  Roseobacter denitrificans
Pathway
Glycine, serine and threonine metabolism
Phenylalanine, tyrosine and tryptophan biosynthesis
Metabolic pathways
Biosynthesis of secondary metabolites
Biosynthesis of amino acids
Module
Tryptophan biosynthesis, chorismate => tryptophan
Class
Metabolism; Overview; Biosynthesis of amino acids [PATH:rde01230]
Metabolism; Amino acid metabolism; Glycine, serine and threonine metabolism [PATH:rde00260]
Metabolism; Amino acid metabolism; Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:rde00400]
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: 
Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
RoseoBase: 
UniProt: 
Position
complement(3771597..3772829)
Genome map
AA seq 410 aa AA seqDB search
MANDLFNSFMTGPDENGRFGDFGGRFVSETLMPLILELEEQYENAKTDESFWAEMNDLWT
HYVGRPSPLYFAERLTDHLGGAKVYMKRDELNHTGAHKINNVLGQIILARRMGKTRIIAE
TGAGQHGVATATVCAKFGLKCVVYMGAHDVERQAPNVFRMRLLGAEVVPVTSGRGTLKDA
MNDALRDWVTNVRDTFYCIGTVAGPHPYPAMVRDFQAIIGKEVRTQMTAAEGRFPDTVIA
AIGGGSNAMGLFYPFLDDKEVGIIGVEAGGKGVNAKMEHCASLTGGRPGVLHGNRTYLLQ
DDDGQILEGFSISAGLDYPGIGPEHAWLHDIGRAQYVSITDVEALEAFQLCCELEGIIPA
LEPSHALAHVMKIAPDLPSDHIICMNMCGRGDKDIFTVAKALGFEMGEFA
NT seq 1233 nt NT seq  +upstreamnt  +downstreamnt
atggccaatgatcttttcaattctttcatgacgggtccggatgaaaacggacgttttggc
gatttcggggggcgctttgtctccgagacgctgatgccgctgattctggagttggaagag
caatatgaaaacgccaagacggatgaaagtttctgggccgaaatgaatgacctgtggacc
cattacgtgggccgacccagcccgctttattttgccgaacgcctgacggatcatctgggc
ggcgcaaaggtctatatgaaacgtgatgagctgaaccataccggcgcgcacaagatcaac
aacgtgctgggccagatcattctggcgcgccggatgggcaaaacgcgcatcattgcggaa
acgggcgcgggtcagcatggcgtggccacggcgacggtctgtgcaaagttcggtttgaaa
tgtgtcgtctacatgggcgcgcatgacgttgaacggcaggccccgaatgtgttccgcatg
cggcttctgggggctgaggttgtgccggtaacctccggtcgtgggacgctgaaggatgcg
atgaacgacgccctgcgcgactgggtgaccaatgtgcgcgacacgttttactgcatcggg
acggttgcgggtccacatccttaccctgccatggtgcgggattttcaggcgatcatcggc
aaggaagtgcgcacgcaaatgaccgctgcggagggccgcttcccggatacggtgatcgca
gcgatcgggggcgggtccaatgccatgggcctgttctatccgtttctcgacgacaaggag
gttggcatcatcggcgtcgaggcgggcggcaaaggcgtcaatgccaagatggagcattgc
gcatcgctgacaggcgggcggcccggcgtgctgcatggcaaccggacgtatctgttgcag
gatgatgacggtcagattctcgaagggttctcaatttcggcgggtctggattacccgggc
atcgggccggaacatgcatggctgcatgacatcgggcgcgcgcaatatgtgtcgatcacg
gatgtcgaagcgcttgaggcgtttcagttgtgctgcgaacttgaaggcatcatcccggcg
ctggaacccagccacgcgctggcccatgtgatgaaaatcgcacctgacctgccatctgac
cacatcatctgcatgaacatgtgcgggcgtggcgacaaggatatctttaccgttgccaaa
gcgcttgggttcgagatgggggagtttgcctga

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