KEGG   Roseobacter denitrificans: RD1_3991Help
Entry
RD1_3991          CDS       T00376                                 

Gene name
glyA
Definition
serine hydroxymethyltransferase (EC:2.1.2.1)
Orthology
K00600  
glycine hydroxymethyltransferase [EC:2.1.2.1]
Organism
rde  Roseobacter denitrificans
Pathway
Glycine, serine and threonine metabolism
Cyanoamino acid metabolism
Glyoxylate and dicarboxylate metabolism
One carbon pool by folate
Methane metabolism
Metabolic pathways
Biosynthesis of secondary metabolites
Microbial metabolism in diverse environments
Biosynthesis of amino acids
Module
C1-unit interconversion, prokaryotes
Class
Metabolism; Carbohydrate metabolism; Glyoxylate and dicarboxylate metabolism [PATH:rde00630]
Metabolism; Energy metabolism; Methane metabolism [PATH:rde00680]
Metabolism; Amino acid metabolism; Glycine, serine and threonine metabolism [PATH:rde00260]
Metabolism; Metabolism of other amino acids; Cyanoamino acid metabolism [PATH:rde00460]
Metabolism; Metabolism of cofactors and vitamins; One carbon pool by folate [PATH:rde00670]
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
RoseoBase: 
UniProt: 
Position
3849125..3850420
Genome map
AA seq 431 aa AA seqDB search
MNAPHRAPGFFTQSLADSDPELFGSITDELGRQRDEIELIASENIVSAAVLEAQGSIMTN
KYAEGYPGRRYYGGCQFVDVAENLAIERACKLFGCGFANVQPNSGSQANQGVFTALLQPG
DTILGMSLDAGGHLTHGAKPNQSGKWFNAVQYGVRREDNLLDYDQVEALAKEHQPKLIIA
GGSAIPRQIDFARMREIADMVGAYLHVDMAHFAGLVAAGEHPSPFPHAHVATTTTHKTLR
GPRGGMILTNDEALAKKFNSAIFPGIQGGPLMHVIAAKAVAFGEALRPDFKSYTKQVIAN
AQALSDQLIKGGLDTITHGTDTHVVLVDLRPKGVKGNATEKALGRAHITCNKNGVPFDPE
KPMVTSGIRLGSPAGTTRGFGEPEFRQIADWIIEVVDGLAANGEDNNSAVEAKVKAEVAQ
LCARFPMYPNL
NT seq 1296 nt NT seq  +upstreamnt  +downstreamnt
atgaacgccccccaccgcgcccctggctttttcacgcaatcgctggctgacagcgatcct
gagcttttcggctcgatcacggatgagctgggccgccagcgtgacgagatcgagttgatc
gcgtcggaaaacatcgtttctgccgccgtgcttgaggcgcagggctcgatcatgaccaac
aaatacgccgaaggctatcccggacggcgctattatggcggctgccagttcgtcgatgtg
gccgaaaacctcgccatcgagcgcgcctgcaaactctttggttgcggctttgccaatgtg
cagcccaattccggcagccaggccaatcagggcgtgttcactgccctcttgcagcccggc
gacaccatcctcggcatgagccttgatgcgggcgggcacctgacgcatggcgccaagccc
aaccagtccggcaagtggttcaacgccgtgcaatacggtgtgcgccgcgaagacaacctg
ctggattatgaccaggtcgaagcgctcgccaaggagcaccagcccaagctgatcatcgcc
ggcggctcggccatcccgcgccagatcgactttgcccgcatgcgcgaaatcgccgatatg
gtcggggcgtatctgcacgtggacatggcgcatttcgcaggcctcgtggcggcgggcgaa
cacccaagccccttcccgcacgcccatgtggccaccaccacgacgcataagaccctgcgc
ggcccgcgcggcggcatgatcctgacgaacgacgaggcgctggcgaaaaagttcaactcc
gccatcttccccggcattcagggcggcccgctgatgcatgtgatcgctgccaaggccgtg
gcctttggcgaggcgctgcggcccgatttcaaatcctacaccaagcaggtcatcgccaac
gcgcaggccctgagcgaccagctgatcaagggcgggctggacacgatcacgcatggcacc
gacacccatgtggtgctggtcgacctgcgccccaagggcgtgaagggcaatgcgaccgaa
aaggcgctggggcgtgcgcatatcacctgcaacaagaacggcgtgccctttgatccggaa
aagccgatggtgacctccggcatccgtctgggcagccctgccgggacgacgcgcgggttc
ggcgagccggagttccgccagatcgccgactggatcatcgaagtggtcgacggcctcgcc
gccaacggcgaagacaacaacagcgccgtcgaagccaaggtcaaagcagaagtcgcacaa
ctctgcgcaagattcccaatgtatccgaacctctaa

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