KEGG   Roseobacter denitrificans: RD1_4065
Entry
RD1_4065          CDS       T00376                                 
Symbol
hisS
Name
(GenBank) histidyl-tRNA synthetase, putative
  KO
K01892  histidyl-tRNA synthetase [EC:6.1.1.21]
Organism
rde  Roseobacter denitrificans
Pathway
rde00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:rde00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    RD1_4065 (hisS)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:rde01007]
    RD1_4065 (hisS)
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:rde03016]
    RD1_4065 (hisS)
Enzymes [BR:rde01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.21  histidine---tRNA ligase
     RD1_4065 (hisS)
Amino acid related enzymes [BR:rde01007]
 Aminoacyl-tRNA synthetase
  Class II (A)
   RD1_4065 (hisS)
Transfer RNA biogenesis [BR:rde03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Other AARSs
    RD1_4065 (hisS)
 Prokaryotic type
    RD1_4065 (hisS)
SSDB
Motif
Pfam: tRNA-synt_His HGTP_anticodon tRNA-synt_2b tRNA-synt_2d PDZ_6
Other DBs
NCBI-ProteinID: ABG33509
RoseoBase: RD1_4065
UniProt: Q160T4
Position
complement(3929060..3930619)
AA seq 519 aa
MAKPKKTPRPKAQTPKGFRDYFGAEVSQRAEMLQRIAGVYHRYGFDALESSGVETVEALG
KFLPDVDRPNEGVFAWQEDADADKPGDWLALRYDLTAPLARVYAQHQNDLPKPYRRYAMG
PVWRNEKPGPGRFRQFYQCDADTVGASSVAADAEICAMLCDCLEAVGIERGDYVVRINNR
KVLNGVLEVIGALGDEPRLSQHFQEMAENLGKKMTAAKVGIVLRTIDKLDRLGKEGVRSL
LGPGRKDESGDLTFGADLSKAQIDVVMSFLEAKGGTNSETLINLREIVGRSRIGKEGVDE
LEKISELLSAGSYGPDRIVIDPSVVRGLGYYTGPVYEAELTFEIQDDKGRTRNFGSVAGG
GRYDDLVKRFTGQEVPATGVSIGVDRLLAALHAKGRLDTTDVGPVVVTVMDRDRMADYQA
MVAELRQAGIRAEVYLGNPKNFGNQLKYADTRNSPVAVIEGGDEHEKGVVQIKDLILGAE
IAKSATLEEWKDRPSQFEVPRAELVAKVREILAQHGLEK
NT seq 1560 nt   +upstreamnt  +downstreamnt
atggccaagcccaaaaagacaccccgccccaaggcgcagacgcccaagggctttcgcgac
tatttcggtgccgaagtcagccagcgcgcagagatgctgcaaaggattgccggggtctat
catcgttatgggtttgatgcgctggaaagttcaggcgtggaaacggttgaggctctgggc
aagttcctgcccgatgtggaccgccccaacgagggcgtgttcgcctggcaggaagacgcg
gacgcggacaagcccggcgactggctcgccctgcgctatgatctgacggcccccttggcg
cgggtctatgcccagcaccagaacgacctgcccaaaccttaccgccgctatgcgatgggc
cccgtctggcgcaacgaaaagcccggtccggggcggttccgccagttttatcagtgcgat
gcggatacggtcggcgcgtcttctgttgcagcggatgccgagatctgcgcgatgctctgc
gattgccttgaggcggtggggatcgagcgcggcgactacgtggtgcggatcaacaaccga
aaggtgttgaatggggtgcttgaggtaatcggcgcgctaggtgacgagccgcgcctgtca
caacattttcaagaaatggcagaaaaccttggtaaaaagatgacagcggcaaaggttgga
attgtcttacgcactatcgataaattggatcgcttggggaaagagggtgttcgttccttg
ctggggccaggacgcaaagatgagtcgggtgaccttacatttggagccgatttgtcaaag
gctcagatcgacgtcgttatgagctttctggaagcaaaaggcggaacaaactcagaaact
ctgattaacctcagagaaattgtagggcgttctagaattggcaaggaaggtgttgatgaa
ctcgaaaagatatccgagctgctttccgcaggatcctatggccccgaccgcatcgtcatc
gacccttctgtcgtgcgcggccttggctactacacgggtccggtctatgaggcggaactc
accttcgaaattcaagacgacaagggccgcacgcgcaactttgggtccgtcgcagggggc
gggcggtatgatgatctggtgaaacgctttaccgggcaggaagtgcctgcgacgggcgtg
tccatcggggtggatcggctgctggccgctctgcacgccaaggggcgtttggacaccaca
gacgtaggtcccgtggtcgtcaccgtcatggatcgcgaccgtatggcggattatcaggcg
atggtcgctgaactgcggcaggcgggcatccgtgcggaggtctatctgggcaatcccaag
aactttggcaatcaactcaaatatgccgatacgcgcaacagccccgtcgccgtgatcgag
ggcggcgacgagcacgaaaagggcgtggtgcagatcaaggacctgatccttggtgccgaa
atcgccaaaagcgccacgcttgaggaatggaaggaccgccccagccagttcgaggtgccg
cgcgcagagcttgttgcaaaggtgcgtgaaattctggcgcagcacgggttggaaaaatga

DBGET integrated database retrieval system