KEGG T01343: HMPREF0733

Rothia dentocariosa: HMPREF0733_10027

Entry

HMPREF0733_10027 CDS T01343

Gene name

odhA

Definition

2-oxoglutarate dehydrogenase E1 component (EC:1.2.4.2)

Orthology

K00164

2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]

Organism

rdn Rothia dentocariosa

Pathway

rdn00020	Citrate cycle (TCA cycle)
rdn00310	Lysine degradation
rdn00380	Tryptophan metabolism
rdn01100	Metabolic pathways
rdn01110	Biosynthesis of secondary metabolites
rdn01120	Microbial metabolism in diverse environments

Class

Metabolism; Carbohydrate metabolism; Citrate cycle (TCA cycle) [PATH:rdn00020]
Metabolism; Amino acid metabolism; Lysine degradation [PATH:rdn00310]
Metabolism; Amino acid metabolism; Tryptophan metabolism [PATH:rdn00380]

SSDB

Motif

Pfam:

Transket_pyr E1_dh 2-oxoacid_dh

Other DBs

NCBI-GI:

311111697

NCBI-GeneID:

9901277

UniProt:

E3H4D9

Position

29311..33141

AA seq 1276 aa
MCARLEEAHTKPTYTQRDDSPLEDAGRLCRISPDATDKFTVKEEAFTVPNLPDHLVPEEF
AGNEWFVEEQYERYQQDKNLVDPSWWPIFQSIDKALQGTPAVSAPVTATQKAEATPSAPA
AAASITTPAPQPAAPTKSTASPAPKTSSKAENVEPLEDKIVPLRGPAKAVAANMEDSLTV
PTATTVRAVPAKLLIENRSAINAYLARTRGGKISFTHIIGYAVIRALAAMPSMNVTYGHD
EKGKPIAIHNANVNFGLAIDLPRPDGSRNLVVPNIKGAQTLSFLEFWQAYDDIVKRGRAG
QLGLEDFQGTTVTLTNPGGIGTVHSVPRLSKGQAAIIGVGALEYPAEFRGVAETMVAQHA
ISKVITLTSTYDHRVIQGAGSGEFLKIVESYLLGAEGFYDEIFQAIQIPFEPVRWSQDNQ
VNPDTEVSKVARIQQLIHAYRVHGHLIARTNPVGYQLHSNPDLNVESYGLTLWDLDRVWP
TGGFGDKEQLPLRTILARLREAYAGTLAVEYMYMEDRKAREWFQEKLEHGYSKPSRERLM
HVLEKLVEAEAFETFLQTKYLGQKRFSLEGGESLIPLLDAIINKAADNNMHGVAIGMAHR
GRLNVLTNIAGKSYAQIFREFSGTAAPYEGGSGDVKYHLGTEGTFTSTSGKQTQVYLAAN
PSHLEAVNTVLEGIVRAKQDVLNDQGIEGHPILPILIHGDAAFAAQGIVMETLQMANLRG
YTTGGTVHIVVNNQIGFTTSPKDGRTATNATDIARMTKAPVFHVNADDPEAVVRAGRLAF
EYRERFGRDAVIDLLCYRRRGHNEADDPSMTQPKMYQVIDNMPSTRTKYAEALVGRGDIT
QEEADEALSAYHSKLDAIFSETQAAVPAPETPNVAGLELPASQQSTEIVHGGNTAISRDT
FEHIAKAFGEVPEGFTVHKKLKKLCEQRVEMGTNGKVNWGMGELLAFGSLLMEGTDVRMS
GQDVQRGTFVQRHAVLHDHLTDDEWSPLQHLSDHQGKLRIYNSLLSEYGVIGFEYGYSVE
RPDSMVVWEAQFGDFANGAQTIIDEFVSSSEQKWGQRSSLVLLLPHGYEGQGPDHSSARI
ERYLQLCAENNMTVAVPSTPASYFHLLRRHAQHRPYKPLVVISPKQLLRLKAASSSIEDF
TEGSFQPVIGDRSGVTPAQVERVVFVSGRLYYDLEAERAKRGDTKTAIVSVEQLYPLPEA
EIKAQLDLYSNATDIVWAQDEPANQGQWPFMALNLLPIIDYRMRLVSRPASASPAAGTGK
RHAAEAEALMKQVFEG

NT seq 3831 nt +upstreamnt +downstreamnt
atgtgtgcgagacttgaagaggcacacacaaagccaacttatactcagcgtgatgattcg
cccctcgaagatgcgggtcgtctgtgccggatttctccggacgcgacggataaattcaca
gtcaaggaagaggcgtttacagtgccaaatctgccagatcacctggtacctgaggaattt
gccggtaacgaatggttcgtcgaagaacaatatgaacgttatcagcaagacaaaaatctc
gtggatccttcgtggtggcccatttttcagtccattgataaggcccttcaaggaactccg
gcggtctccgccccggtaacagctacccaaaaagccgaggcgacaccttctgctccagcc
gctgcagcatctattactaccccggcacctcagcctgccgcaccaacaaagtcgacagca
tcgcccgctcctaaaacctcatcaaaggcagaaaacgtggaacctttagaagataaaatt
gtacccctacgcggaccggctaaagccgttgccgccaacatggaagactcgctcaccgtt
ccaaccgctacgacggtgcgcgcggtaccagctaaactgctgattgaaaaccgttctgcc
atcaacgcttatttagctcgaacccgcggcggcaagatttctttcacgcatatcattggg
tacgctgttattcgtgcgctcgctgccatgccttcaatgaacgtcacctacggtcatgat
gaaaaaggcaaaccgattgctattcacaatgcgaacgtgaacttcggtctggctatcgat
ctgccccgccctgatggctcccgcaacctcgtggttccgaatatcaagggtgcacagacc
ttgagcttcttggagttctggcaggcctacgacgatatcgtcaaacgtggtcgtgcaggc
cagcttgggctggaagatttccagggaactacggttactctcacgaaccctggcggtatc
ggtaccgtacactctgttcctcgtctttcgaaagggcaggccgcaattatcggtgtgggt
gctcttgaataccctgctgagttccgcggtgtggcggagacgatggtagcccagcatgct
atttccaaggttattacccttacgagcacctatgaccaccgcgttattcaaggtgctggt
tccggcgaattccttaagatagtagagagctacctcttaggtgccgaaggattctatgac
gaaatcttccaggctattcagattcccttcgaacctgttcgatggagccaggataatcag
gttaatcctgatactgaggtttctaaggtcgcccgcattcagcagcttatccacgcgtac
cgcgtgcacggtcaccttatcgcccgcaccaacccagtgggctaccagctacattcaaac
cccgatttgaacgtagaaagctacggtctgactctgtgggatctggatcgagtatggcct
acgggagggtttggcgacaaagaacagcttcctttgcgtactattctggcgcgtctacgt
gaggcatatgcgggtactctcgcggtcgagtacatgtacatggaagaccgtaaagcccgt
gaatggttccaagagaagctggagcatggctacagcaagcctagccgcgaacgtctgatg
catgttctggagaagcttgttgaggccgaggcctttgagaccttcctgcagaccaaatac
ctgggtcagaagcgtttctcactcgaaggcggagagtcgctcatccccctgctggatgcg
atcatcaacaaagcggcagataataatatgcacggggtcgccatcggtatggcgcatcgt
ggccgcctcaatgttctgaccaacatcgcgggtaagtcttacgcccagattttccgtgag
ttcagcggtactgcggcaccatatgaaggtggttctggcgatgtgaaataccaccttggc
accgagggcacgttcacctctacctcaggcaagcagactcaggtgtatttggctgctaat
ccttcacatttggaggctgttaacaccgttctggaaggcatcgtgcgcgccaagcaggat
gttcttaacgaccagggtatcgaaggtcatcccattctgcccatcttgattcatggtgac
gccgcgtttgccgcacagggtatcgtcatggaaaccttgcagatggctaatctgcgtggc
tacactaccggcggcaccgtacacatcgtggtgaataaccagatcggcttcacaacatct
ccgaaggatggccgtaccgccaccaacgcaaccgatattgctcggatgaccaaggcgcct
gtcttccacgtaaacgccgatgaccccgaggctgtagttcgggcaggtcgtctcgcattc
gagtaccgcgagcgcttcggccgcgatgccgtaattgatttactctgctaccgtcgccgt
ggccacaacgaggctgatgacccgtcgatgactcagccgaagatgtaccaggtgatcgat
aatatgccttcgacccgcaccaagtatgcagaggctctggtgggtcgcggcgatatcacc
caagaagaagcagatgaggcattgagtgcataccactcgaagctggatgcgatcttcagc
gagacccaagcggccgtacccgctcccgagacccccaatgttgctgggcttgagctgcct
gcttctcagcagagcaccgaaattgttcatggcggtaacaccgcgatctctcgcgatacc
ttcgagcacatcgcaaaagcattcggcgaagttcccgagggcttcacggttcacaaaaag
ctcaagaaactgtgtgaacagcgcgttgagatgggcacaaacggcaaggtcaattggggc
atgggcgagcttctggcctttggctctctgctcatggaaggcaccgatgtgcgtatgagc
ggccaagacgttcaacgcggtaccttcgtgcagcgtcacgcggtgctgcatgatcatctc
accgatgacgaatggtcaccgctgcagcacctctcggaccatcagggcaagctacgtatc
tacaattcactcctgtctgagtacggtgtcataggcttcgagtatggatactcggttgaa
cgtcccgattcgatggtggtgtgggaggcccagttcggtgactttgcgaacggtgcccag
acgattatcgacgagttcgtgtcatcgtctgaacagaagtggggtcagcgttcttcgctg
gttcttctgctcccccacggttatgaggggcagggcccggaccactcatcagcgcgtata
gaacggtacctgcagttgtgcgctgaaaacaatatgacggttgctgtgccttctaccccg
gcatcgtatttccacctgttgcgtcgtcacgcacagcaccgcccgtataagccgcttgtg
gttattagccctaaacagctcttgcgtttgaaggctgcctcatcctcaattgaggacttc
acggaggggtcattccagcccgttattggcgatcgttccggtgttactccagcccaagtt
gagcgtgtagtctttgtctctggtcgtctctactacgatcttgaggctgagcgtgcaaag
cgcggtgatacgaaaaccgctatcgtctccgttgagcagctttaccccctgcccgaggca
gagatcaaggcgcagctggatttgtactcgaacgccaccgatattgtatgggcacaggat
gagcccgctaaccagggtcagtggccgtttatggctttgaacctgctgccaattattgac
taccggatgcgtttggtttcccgccctgcgtcggcatctcccgcagcaggtacgggtaaa
cgccatgccgctgaagctgaggcactgatgaagcaggtcttcgaaggctaa

All links

Pathway (6)   
   KEGG PATHWAY (6)   
Chemical substance (13)   
   KEGG COMPOUND (13)   
Chemical reaction (5)   
   KEGG ENZYME (1)   
   KEGG REACTION (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (34)   

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