KEGG   Rothia dentocariosa: HMPREF0733_11653
Entry
HMPREF0733_11653  CDS       T01343                                 
Name
(GenBank) AMP-binding enzyme
  KO
K01897  long-chain acyl-CoA synthetase [EC:6.2.1.3]
Organism
rdn  Rothia dentocariosa
Pathway
rdn00061  Fatty acid biosynthesis
rdn00071  Fatty acid degradation
rdn01100  Metabolic pathways
rdn01212  Fatty acid metabolism
rdn02024  Quorum sensing
Module
rdn_M00086  beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:rdn00001]
 09100 Metabolism
  09103 Lipid metabolism
   00061 Fatty acid biosynthesis
    HMPREF0733_11653
   00071 Fatty acid degradation
    HMPREF0733_11653
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    HMPREF0733_11653
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01004 Lipid biosynthesis proteins [BR:rdn01004]
    HMPREF0733_11653
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rdn04147]
    HMPREF0733_11653
Enzymes [BR:rdn01000]
 6. Ligases
  6.2  Forming carbon-sulfur bonds
   6.2.1  Acid-thiol ligases
    6.2.1.3  long-chain-fatty-acid---CoA ligase
     HMPREF0733_11653
Lipid biosynthesis proteins [BR:rdn01004]
 Acyl-CoA synthetase
  Long/very long chain acyl-CoA synthetase
   HMPREF0733_11653
Exosome [BR:rdn04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   HMPREF0733_11653
  Exosomal proteins of breast cancer cells
   HMPREF0733_11653
SSDB
Motif
Pfam: AMP-binding LEA_4 Apolipoprotein Prot_ATP_ID_OB_C V-ATPase_G
Other DBs
NCBI-ProteinID: ADP41110
UniProt: E3H0U3
Position
complement(1827293..1829398)
AA seq 701 aa
MQIVSVPAEAMVDPALNLTSIVERHASDTSNPVLYRWQMSPGNWQDIHAHQFHDMVVSVA
KGLIAHGVKPGDRIGIMSRTRFEWALIDFAIWYAGAISVPIYETNAPAQVAWALSHSEAQ
AIFVENDKLAQITDRAHKFQPLSIKNRWVIENGDLDMLIRAGLDVSDAELEAARTHAHAD
SLATIVYTSGTTGKPKGCALTHGNFLNLSLNTRIVEPEIANPRSSSLIFLPLAHVLARFI
QILALDSGVVVGHSPTIKNLAADLDSFKPTMLLVVPRVFEKIYEGALAKAARGGTLNKNL
FKRSVNAAIAWSEAKVSGRLPLKLAAQYALYDKLVYAKLRAAMGGKLRYAVCGGGPLSPR
LNHFYHAVGVRVVEGYGLTETCAPIAAGRISNFQIGAIGPLLPGSQGRLAEDGELELRGI
GVMKEYYKNPAENAQSFTDDGWFKSGDLARFDDQGLLKIVGRKKEIIVTAGGKNVIPGTA
ENHLRTSPLVSQAMLVGDQKPFIAALVTLDPDTLPDQLEHLGLPRSLSMPEAAVHPAVRA
AIQRIIDEANQLVSRAEAIREFRIMGKDLTEADGYLTPSQKLKRAKILQDFSAYVDDIYS
RVSESANNKLERLQSYAEQASDRLQEFKTEKTEKLHDLKVEATERLEEFKGQAAEKLSQH
QPVRATPSDEERTYPDGKEHMRGDLENNKKLHESLRKNRSS
NT seq 2106 nt   +upstreamnt  +downstreamnt
atgcaaattgtctccgtacccgcagaagctatggtagatccagcgttgaatctcaccagt
attgtggaacgccatgcctccgacacctcaaatccagtgctgtatcggtggcagatgtcg
cctggcaattggcaggacattcacgcacatcagtttcatgacatggtggtttccgtagct
aagggactcattgcccatggcgttaaacctggtgatcgcataggtattatgagccgcacc
cgctttgagtgggctttaatagattttgctatctggtatgccggagccatatcggtacct
atctacgagacgaacgcacccgcacaagttgcctgggccttatcgcattctgaggcacaa
gcgatttttgtggagaacgataaactggcccagattactgatagagcgcataaatttcag
cctctcagtattaagaaccgttgggtcattgaaaatggggatttggatatgctcatcaga
gcaggtttagacgtctccgatgccgaacttgaagcggcccgcacgcatgctcatgccgat
tcgcttgcaaccatcgtctacacgtccggtacaacaggtaaacctaagggatgcgcactc
acgcacggaaactttcttaacttgagtcttaacacgcgcatagtggaaccggaaatcgct
aatccgcgcagttcttcccttatcttcttacctttagcgcatgttctggcaaggtttatt
cagattcttgctttggattccggagttgttgttggacactcccctaccattaagaatctt
gctgctgatctggatagttttaagcccactatgctgctggtagtaccgcgggtctttgag
aagatttatgagggagcattagcaaaggcggcgcgaggcggtaccttaaacaaaaatctt
tttaagcgatcagttaacgccgctatcgcttggtctgaggctaaagtttctgggaggctt
cctctcaagttagcggcgcaatatgcactctacgataagctagtttatgcgaaattgcgt
gccgctatgggcggcaaattacgttacgcggtttgtggaggcgggcctctctccccacgg
ttgaatcatttctaccatgcagtaggagtccgagtggttgagggttatggtctcacggaa
acatgtgcgccgattgctgccgggcgcatcagcaattttcagatcggggctattggtccg
cttctgccaggttctcaaggccgtcttgccgaagatggcgagcttgaactgcgtggaatc
ggcgtgatgaaggaatactacaaaaaccccgctgaaaatgcccagtctttcactgacgat
ggatggttcaagagcggtgatctagcccgtttcgatgatcaagggctcctcaaaattgtg
gggcgcaaaaaagaaatcatcgtgacggccgggggcaagaatgttattccgggcactgcg
gagaaccatctacgaacttctcccttggtatctcaggctatgctcgtgggagatcagaaa
ccctttattgcggctttagttactctcgatcccgatactctccccgatcagcttgaacat
ttggggcttccgcgttccctttccatgccggaggccgccgtgcatcctgccgtgcgtgcc
gcgatccagcgcattattgacgaggctaatcaactggtatctcgcgcagaagctatccgc
gaattccgcattatgggtaaggatttgacggaggcggacggctatttaacaccttctcaa
aagctcaaacgggctaagattctgcaggatttttctgcttatgtggatgacatctatagc
cgtgtttcggaaagcgctaataataaactcgaacgtctgcaaagctacgccgagcaagct
tctgataggctccaagagttcaaaacagagaagacagaaaaacttcatgatctaaaggtc
gaagcgactgaacgccttgaagagtttaaaggacaagcggcggaaaagttatctcagcat
cagccagtccgagccacaccttcagatgaagaacgtacataccctgatggtaaagagcac
atgcgcggagatttagaaaacaacaaaaagcttcatgaatctcttcggaagaatcgtagc
tcttga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (6)   
   KEGG PATHWAY (5)   
   KEGG MODULE (1)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (31)   

Download RDF
DBGET integrated database retrieval system