KEGG   Rothia dentocariosa: HMPREF0733_11822Help
Entry
HMPREF0733_11822  CDS       T01343                                 

Gene name
trpB
Definition
tryptophan synthase subunit beta (EC:4.2.1.20)
Orthology
K01696  
tryptophan synthase beta chain [EC:4.2.1.20]
Organism
rdn  Rothia dentocariosa
Pathway
Glycine, serine and threonine metabolism
Phenylalanine, tyrosine and tryptophan biosynthesis
Metabolic pathways
Biosynthesis of secondary metabolites
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:rdn00001]
 Metabolism
  Overview
   01230 Biosynthesis of amino acids
    HMPREF0733_11822 (trpB)
  Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    HMPREF0733_11822 (trpB)
   00400 Phenylalanine, tyrosine and tryptophan biosynthesis
    HMPREF0733_11822 (trpB)
Enzymes [BR:rdn01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.20  tryptophan synthase
     HMPREF0733_11822 (trpB)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: 
Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
2018598..2019929
Genome map
AA seq 443 aa AA seqDB search
MSENLADAFLEGKSLKNAPGPYFGQYGGRWMPESLIAAMDELESTFQNAKQDPEFIAEFQ
RLSAEYSNRPSLLTEVPRFSEHAGARIFLKREDLNHTGSHKINNVLGQALLAKRMGKTRL
IAETGAGQHGVATATAAALFGMDCVIYMGEEDTERQALNVARMQLLGAKVIAVQNGSRTL
KDAINEALRDWVANVENTHYLLGTAAGAHPFPTMVRFFHDAIGSEAREQIQQMTGRLPHG
VSACVGGGSNAIGIFHAFLDDHDVKLYGFEAGGDGVETGRHAATINLGRPGMLHGAVTYL
MQDEDGQTIESHSISAGLDYPGVGPEHSYLSDLGRVSYQPVTDTEAMDAFQLLCRTEGII
PAIESAHALAGALRVCQEWAHQDSESAREKIMVVCLSGRGDKDMETALKWFDLGKATPSS
SLMTGNKEAVAEKAVQAESEAHA
NT seq 1332 nt NT seq  +upstreamnt  +downstreamnt
atgagcgaaaacctggcagacgcatttcttgaggggaaatccctcaaaaatgcacccggt
ccctacttcgggcaatacggtgggcgatggatgcctgaatcgttaattgccgccatggat
gagcttgagtctaccttccagaatgctaagcaggatccagagtttattgcggaatttcag
cgactctctgctgaatactcgaatcgtccttcattgctaacggaagttccgcggttctca
gagcacgctggggctcggatctttctgaaacgtgaagatcttaaccataccggtagccac
aagattaacaatgttttaggacaagcacttctcgcaaagcgcatgggtaagacacgtctg
atcgcggagaccggtgctggtcagcacggcgtagcaacggcaacggctgctgcgcttttc
ggcatggactgtgtgatttacatgggtgaagaagatactgagcggcaggctttgaacgtg
gcgcgtatgcagcttttgggcgcgaaagttattgccgttcagaatggctcccgtactctg
aaagacgctattaatgaggctcttcgagactgggtcgctaatgtcgagaatacccactat
ctgctgggtacagcggcgggagcacatccttttcctacaatggtgcgtttctttcatgat
gctattggttctgaagcacgcgaacaaattcaacagatgactgggcgtcttccccacgga
gtttctgcctgtgttggtgggggttcaaacgccattggaatcttccatgcattccttgat
gaccacgatgtaaaactttacggttttgaggcggggggagacggtgtagaaaccggacgt
cacgccgcaactattaatctaggccgcccaggaatgcttcacggtgccgtaacctacctg
atgcaagacgaagatgggcaaactatagagtcgcattcgatttctgctggcctggactat
cccggcgttggacccgaacactcatacctttcagacttaggccgtgtcagctaccagccg
gtgaccgatactgaagctatggatgcttttcaactgctttgccgtactgaaggtattatt
cctgccatcgaatcggcgcatgcacttgccggtgcgttacgggtctgtcaggagtgggcg
catcaagattctgagtctgcccgtgaaaaaataatggtggtgtgcctatctggtcgtggc
gataaagacatggagactgccttgaaatggttcgatctagggaaagcaaccccgtcatct
tctctcatgacaggcaataaagaggcagttgctgagaaggcagtgcaggcagaaagcgag
gcgcacgcatga

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