KEGG   Roseateles depolymerans: RD2015_1337
Entry
RD2015_1337       CDS       T04166                                 
Name
(GenBank) Dihydrolipoamide dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
rdp  Roseateles depolymerans
Pathway
rdp00010  Glycolysis / Gluconeogenesis
rdp00020  Citrate cycle (TCA cycle)
rdp00260  Glycine, serine and threonine metabolism
rdp00280  Valine, leucine and isoleucine degradation
rdp00310  Lysine degradation
rdp00380  Tryptophan metabolism
rdp00620  Pyruvate metabolism
rdp00630  Glyoxylate and dicarboxylate metabolism
rdp00640  Propanoate metabolism
rdp00785  Lipoic acid metabolism
rdp01100  Metabolic pathways
rdp01110  Biosynthesis of secondary metabolites
rdp01120  Microbial metabolism in diverse environments
rdp01200  Carbon metabolism
rdp01210  2-Oxocarboxylic acid metabolism
rdp01240  Biosynthesis of cofactors
Module
rdp_M00009  Citrate cycle (TCA cycle, Krebs cycle)
rdp_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
rdp_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
rdp_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:rdp00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    RD2015_1337
   00020 Citrate cycle (TCA cycle)
    RD2015_1337
   00620 Pyruvate metabolism
    RD2015_1337
   00630 Glyoxylate and dicarboxylate metabolism
    RD2015_1337
   00640 Propanoate metabolism
    RD2015_1337
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    RD2015_1337
   00280 Valine, leucine and isoleucine degradation
    RD2015_1337
   00310 Lysine degradation
    RD2015_1337
   00380 Tryptophan metabolism
    RD2015_1337
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    RD2015_1337
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rdp04147]
    RD2015_1337
Enzymes [BR:rdp01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     RD2015_1337
Exosome [BR:rdp04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   RD2015_1337
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Biotin_lipoyl Pyr_redox FAD_oxidored GIDA Biotin_lipoyl_2 Thi4 FAD_binding_2 NAD_binding_8 GCV_H PYNP_C AlaDh_PNT_C Pyr_redox_3 FAD_binding_3 HI0933_like HlyD_3 HlyD_D23
Other DBs
NCBI-ProteinID: ALV05828
UniProt: A0A0U3MV72
Position
1563998..1565854
AA seq 618 aa
MALVEVKVPDIGDFKDVAIIEVLVKPGDTIKAEQSLVTVESDKASMEIPSSAAGVVKELK
VKLGDKINQGDLLVTLESDAAAAPAPAAPAPAPAGSPAPAAAAAAPAPATAPAQPTAAPA
AGPAPQAATYTGSADAEFDLIVLGSGPGGYSAAFRAADLGLKVALVERYATLGGVCLNVG
CIPSKALLHVAAVMDEVKHFADLGVAYAEPTVELPKLLAHKQKVVGKLTKGLDMMSKMRK
VTVVRGYGQLLDAHHLSVEETSGTGQERSGKTQTLKFKKIILAAGSQAVRLPFMPNDPRV
IDSTGALELTAKPKRMLIVGGGIIGLEMGTVYSTLGARLDVVEMLPTLMTGADRDLVKVW
QKMNAPRFDNIMLNTKTVSAEATPEGIKVTFEGEGAPKEPQVYDLVLQAVGRSPNGKKIG
ADKAGVVVTDRGFIPVDVQMRTNVPNVFAIGDLVGQPMLAHKAVHEGHVAAEVIAGELLG
DEALAKSRFDARVIPSVAYTDPEVAWVGITEDEAKARGIKYKKGLLPWNASGRAIANNRD
EGFTKLLFDEETHRIIGGGIVGTHAGDMIGEIALAIEMGADAVDIGKTIHPHPTLGESIG
LAAEVAHGSCTDVPPARK
NT seq 1857 nt   +upstreamnt  +downstreamnt
atggcattggtagaagtcaaagtccctgacattggcgatttcaaggacgttgcgatcatc
gaagtcctggtcaagccgggcgacaccatcaaggcggaacagagcctggtgacggtggaa
agcgacaaggcatcgatggagattccgtcgtcggccgctggcgtggtcaaggagctcaag
gtcaagctgggcgacaagatcaaccagggcgacctgctggtcacgctggagagtgatgca
gctgccgcaccggcgcctgcggcacccgcacccgcacccgcaggctcacccgcacccgca
gcggctgctgcagcaccggcccccgccacagcgccggcccagccgaccgctgctcccgct
gcaggtccggccccacaggccgccacctacaccggcagcgccgacgccgaattcgacctc
atcgtcctgggcagcggcccgggcggctactcggccgctttccgcgccgcggacctgggg
ctgaaggtggccctggtcgagcgttatgcgacgctgggcggggtttgcctgaacgtcggc
tgcatcccatccaaggccctgctgcatgtggcggcggtcatggacgaggtcaagcatttc
gccgacctgggcgtggcctatgccgaacccacggtggagctgcccaagctgctggcccac
aagcagaaggtggtgggcaagctgaccaagggcctggacatgatgtccaagatgcgcaag
gtcaccgtggtgcggggctacggccagttgctcgacgcccatcacctgtcggtcgaggag
accagcggcaccgggcaggagcgcagcggcaagacgcagacgctgaagttcaagaagatc
atcctggcggcagggtcgcaggcggtgcgcctgcccttcatgccgaacgacccgcgggtg
atcgactcgaccggcgcgcttgagctgacggccaagcccaagcgcatgctgatcgtgggc
ggcggcatcatcggcctggaaatgggcacggtgtactccaccctgggcgcccgcctggac
gtggtggagatgctgcccacgctgatgaccggcgcggaccgcgacctggtcaaggtgtgg
cagaagatgaatgcgccgcgcttcgacaacatcatgctgaacaccaagacggtgtcggcc
gaggccacgcccgaaggcatcaaggtgaccttcgaaggcgagggcgcgccgaaggaaccg
caggtgtacgacctggtgctgcaggccgtgggccgcagccccaacggcaagaagatcggt
gcggacaaggccggtgtggtggtgaccgaccgcggcttcatcccggtggacgtgcagatg
cgcaccaacgtgcccaacgtgtttgccatcggcgacctggtcggccagccgatgctggcg
cacaaggcggtgcatgaaggccacgtggcggcggaagtcatcgccggcgagctgctcggc
gacgaggccctggccaagtcccgcttcgatgcccgcgtcatccccagcgtggcctacacc
gatccggaagtggcctgggtgggcatcaccgaagacgaggccaaggctcgaggcatcaag
tacaagaagggcctgctgccctggaatgcatcgggccgcgccattgccaacaaccgcgat
gaaggcttcaccaagctgctgttcgatgaagagacgcatcgcatcatcggtggcggcatc
gtcggcacccatgccggcgacatgatcggcgagatcgcgctggccatcgagatgggcgcc
gacgcggtggacatcggcaagaccatccacccgcatccgaccctgggcgaaagcatcggg
ctggcggcggaagtggcgcacgggtcctgcaccgacgtgccgccggctcgcaaatga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (23)   
   KEGG PATHWAY (16)   
   KEGG MODULE (7)   
Chemical substance (27)   
   KEGG COMPOUND (27)   
Chemical reaction (11)   
   KEGG ENZYME (1)   
   KEGG REACTION (10)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (18)   
   Pfam (18)   
All databases (94)   

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